Pseudomonas sp. NS1(2017): CI807_05430
Help
Entry
CI807_05430 CDS
T11105
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns00300
Lysine biosynthesis
psns00470
D-Amino acid metabolism
psns01100
Metabolic pathways
psns01110
Biosynthesis of secondary metabolites
psns01120
Microbial metabolism in diverse environments
psns01230
Biosynthesis of amino acids
Module
psns_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CI807_05430 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CI807_05430 (lysA)
Enzymes [BR:
psns01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CI807_05430 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ASV35642
UniProt:
A0A223VJW8
LinkDB
All DBs
Position
1115584..1116831
Genome browser
AA seq
415 aa
AA seq
DB search
MDAFNYRDGELFAEGVALSAIAQRFGTPTYVYSRAHIEAQYRSFTDALDGVPHLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGKADKIVFSGVGKTRDDMRRALEVGVH
CFNIESTDELERLQVVAAEMGVRAPISLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLEVLGVDCHIGSQLTTLPPFLDALDRLLALIDRLGECGIYLHHIDLGGGV
GVRYRDEEPPLIADYIQAVRERIEGRDLTLMFEPGRYIVANAGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMNVTAVTPRASEARAYDIVGPICETGDFLAKDRQLALEEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGDQAFEVRRRETVAELYAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgggacggcgagctgttcgcggaaggcgtggcgttgtccgcg
attgcccagcgctttggcaccccgacctatgtgtattcccgtgcacatatcgaagcccaa
taccgctccttcaccgacgccctcgacggcgtgccgcacttggtgtgctacgcggtcaag
gccaactccaacctcggcgtactgaatgtcctggcgcgtctcggcgctggtttcgacatc
gtgtcccgtggcgagctggaacgcgtactggccgctggtggcaaggctgacaagatcgtg
ttctccggcgtcggcaagacccgcgatgacatgcgccgtgccctggaagttggcgtgcat
tgcttcaacatcgaatccaccgacgagctggaacgcctgcaggtcgtggccgccgagatg
ggcgttcgcgcgccgatctccctgcgcgtcaaccctgacgtcgatgccggcacccacccg
tatatttccaccggtctcaaagagaacaagttcggcatcgccattgccgacgccgaggac
gtatacatccgcgccgcgcaactgccgaacctggaagtgctgggtgtcgactgccatatc
ggctcgcaactgaccacattgccgccgttcctggatgcgctcgaccgcctgctggcgttg
atcgaccgtctcggtgaatgcggcatctacctgcaccacatcgacctcggtggtggcgtg
ggcgtgcgttatcgcgacgaagagccgccgctgattgccgactatatccaggcggtgcgc
gagcgcatcgaaggccgtgacctgacgctaatgttcgagcctggccgctatatcgtcgcc
aatgccggcgtgctgctgacccaggtcgagtacctcaagcacacggagcacaaggatttc
gccatcgtcgacgcggcgatgaacgacctgatccgcccggcgctgtaccaggcctggatg
aatgtcaccgccgtgacgccgcgcgccagcgaagcccgcgcctacgacatcgtcggtccg
atctgcgagaccggcgacttcctggccaaggaccgtcagctggccctggaagaaggcgat
ctgctggccgtgcattcggccggtgcctacgggtttgtcatgagttccaactacaacacc
cgcggccgtaccgccgaggtgctggtggacggtgatcaagcgtttgaagtgcgtcgccgc
gagacggtagccgagttgtatgctggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system