Pseudomonas sp. NS1(2017): CI807_06110
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Entry
CI807_06110 CDS
T11105
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03420
Nucleotide excision repair
psns03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CI807_06110
03430 Mismatch repair
CI807_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_06110
Enzymes [BR:
psns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CI807_06110
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CI807_06110
MMR (mismatch excision repair)
Other MMR factors
CI807_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ASV35770
UniProt:
A0A223VKL6
LinkDB
All DBs
Position
1265766..1267949
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIVNKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQNASTLFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggtcgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaggcgggcctggcccagaccttccagatcctcgacagcgatgac
cagcaacgcctggtcaagcgcgtgatccgcgagctcggcctcgacgaacagcgttggcca
gcgcgtcaggcgcagtggttcatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagcggcgatttgttcctggcgaccatgcgcagcatttatgaagcctacgag
gccgcctgcgtgcgcgccggggtcatcgacttctccgaactcctgctgcgcgccctcgac
ctttggcgcgacaacccaggcctgttggcccattatcagaagcgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcttgctggccaag
ggcggcgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctatcagtattccgaagacttcccggacgcggtgaccatccgt
ctggaacagaactatcgctccaccgccgggattctcaaagcggccaacgccttgatcgcc
aacaacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaggcgatc
aacctgtacgccgcgttcaacgagcacgatgaagcgcgctacgtggtggaaaccatcgaa
agcgcactgaaaaccggcctggcgcgcagtgatatcgcgatcctgtaccgctccaacgcc
caatcgcgggtcttggaagaagccttgctgcgcgaacgcatcccgtaccgcatctatggc
ggccaacgcttcttcgagcgtgccgaaatcaagaacgccatggcttacctgcgtttgctg
gaaggtcgcggcaacgatgcggcgctggaacgggtgatcaacatcccggcccgtggcatc
ggcgagaaaaccgtcgaggcgattcgtgaccacgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctcatcgtcaacaaaggcctgactggccgcgcggcaggcgcgctg
ggcgtgtttgtcgagttgatcgagaacctggcggccaaatgcgcggaaatgccgttgcac
ctgatgacccagaccgtgatcgaacagtccgggctcatcgcctaccacgaagcggaaaaa
ggcgagaaaggccaggcccgggtagaaaaccttgaggaactggtgagcgccgcccgtgcg
ttcgaaaacaccgaggaagacgaggagctgacgccgctggccgcgttcctcggccacgca
tcactggaagccggtgatacccaggcggatgagcatgaagacagcatccagctgatgacc
ttgcacagcgccaagggcctggaattcccgtatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccggcttgaggaagaacgccgcctg
gcctacgtgggcatcacgcgcgccatgcagaacctggtgatgacctacgccgagacccgg
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtacgtgaagtgccgaag
ggtctgatccaggaagtgcggctgtccaacagcgtcagccgcccgttcggtggtggtcag
cagcagaacgccagcacgctgttcgccggttccgagatcccggaaacccagttcagcctt
ggccagcaggtcaggcattcagtgtttggcgaaggcgtgatcctcaatttcgagggcgcg
ggtgcacaggcgcgggtgcaggtgaatttcgccgaaggcagcaagtggctgatgatgggt
tacgcgaagctcgaagccatctga
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