Pseudomonas sp. NS1(2017): CI807_06850
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Entry
CI807_06850 CDS
T11105
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03030
DNA replication
psns03410
Base excision repair
psns03420
Nucleotide excision repair
psns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI807_06850
03410 Base excision repair
CI807_06850
03420 Nucleotide excision repair
CI807_06850
03440 Homologous recombination
CI807_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psns03032
]
CI807_06850
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_06850
Enzymes [BR:
psns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI807_06850
DNA replication proteins [BR:
psns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CI807_06850
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CI807_06850
NER (nucleotide excision repair)
GGR (global genome repair) factors
CI807_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
ASV35912
LinkDB
All DBs
Position
1417711..1420488
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AA seq
925 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPGSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVVISTGDKDMAQLVDGHITLVNTMTGSAMDIDGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPTLPIRGAKTLPAKLEEHRES
AFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYSLLEFKSWIDEIQRDVKRVELKA
APVVEDVVEAVAPTEASYTTILDQATFDIWLKKLNDAKLIAFDTETTGIDAQQAQLVGVS
FAVQPHEAAYIPLTHSYIGAPEQLDRDTVLLALKPLLEDPAKLKVGQHAKFDMNILANCA
IGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL
TFDQIALEQAGPYAAEDADITLRLHQALFAQLSAIPSLASVLTDIEIPLVPVLARIERQG
ALVDKDLLGIQSIELGNKMVELERQAFEIAGEAFNLGSPKQLGAILYEKLGLPVLKKTGK
GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKMLAADYSQIELRIMAHLSKDEGL
MNAFRDNLDVHTATAAEVFKVELDEVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT
AKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTA
INAPMQGTAADIIKKAMVRVDNWLTDSGLDAKVILQVHDELVLEVREDLVAQVSEKIREH
MSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcttatttgtaccgcgccttccac
gcgttgccaccgctgaccacctccaaaggcctgcccaccggtgcggtcaagggcgtgttg
aacatgctcaagagcctgcgcaagcagtatccgggcagcccgttcgcggtggtgttcgac
gcgaagggtgggacctttcgcgatgacatgtacgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagcccctgcaccagagcgtgatcgccctggga
ttcccgttgctctgcgtcgaaggcgtcgaagctgatgacgtgatcggcaccctggctcgc
agcagcgcggctgccaaccgcccggtggtgatctcgaccggtgacaaggacatggcgcag
ctggttgacgggcacattaccttggtcaacaccatgaccggtagcgcgatggatatcgac
ggcgtaaaggagaaattcggcgtcgcaccggagcagatcatcgactatctggcgttgatg
ggcgattcgtccgacaacattccaggcgttccgggtattggtcccaagacggcttccggc
ctgctcgtcggtgtgaacggcggtatcaaagagctttatgagcagttggatatcgtgccg
accctgcctatccgtggcgccaagacgctgccggccaagctggaagagcatcgcgagagt
gcatttctttcttaccaattggcgacaatcaagtgcgacgtaccgctggatgtcggcctg
gatgacctgcacctgatcgagccggatcgcgagaagctgctggagctgtactcgctgttg
gaattcaagagctggattgacgaaatccagcgcgatgtgaagcgtgtggagctcaaggct
gcgcctgttgttgaggacgtcgttgaagccgtcgcgccgacagaggcgagctacaccacc
attctcgaccaggcgaccttcgacatctggttgaagaagctcaacgacgcgaagttgatc
gccttcgacaccgaaaccaccggtatcgacgcccaacaggcgcagttggtcggcgtgtcc
ttcgccgtccagccccatgaagcggcctacatcccgctgacccactcctacatcggcgcg
ccggagcagttggatcgtgacaccgtgctgctggccctcaagccgctgctggaagacccg
gccaagctcaaggtcggccagcatgccaagttcgacatgaacatcctggccaactgcgcc
atcggtggcgacccggcgcacggcattaccgtacgcggcatcgccttcgacaccatgctt
gagtcctacgtgctcaattccacggcaacccgtcacgacatggacagcctggccaaaaag
tacctggactacgacaccgtcgctttccaggacatcgccggcaaaggcgccaaacagctg
acattcgaccagatcgcgctggagcaggctggcccgtatgcggcagaagacgccgatatc
accttgcgcctgcaccaggcgctgtttgcgcaactgtcggccatcccgagcctggcgagt
gtgctcacggatatcgaaatcccattggtgccggtgttggcgcgtatcgagcgccaaggc
gcgctggttgacaaggatctgctgggcatccagagcatcgagctgggcaacaagatggtc
gagctggagcgccaggcgttcgagatcgctggcgaggcgttcaacctgggctcgcccaaa
cagctcggcgcgatcctttacgagaaactcggcctgccggtattgaaaaaaaccggcaag
ggccaggcctccacggctgaagaagtgctggccaaactggccgaagatgactacccgctg
cccaaggtgctgatgcagtaccgcagcatgagcaagctgaaaagcacctataccgaccgc
ctgccggagcagatcaacccgcgcaccgggcgcatccacacgtcctatcaccaggcggtg
gcggccaccgggcgcttgtcgtccagtgatccgaacctgcagaacatcccggtgcgtacc
gctgaagggcggcggatccgccaggcgttcgtcgcgcccaagggctacaaaatgttggcg
gcggactactcgcagatcgaactgcggatcatggcgcacctgtccaaggacgaaggcctg
atgaacgccttccgcgacaacctggacgtgcacaccgctacggcggcagaagtgttcaag
gttgagctggacgaggtcacctcggatcagcgtcgcagcgccaaggcaatcaacttcggc
ctgatctacggtatgggcgcgcagaagctgggcaaggacattggcgtcgataccaagacg
gccaaggcgtatatcgatgtgtatttcgcccgttatcccggggttcgcgagtacatggag
cgcacccgcgcccaggcggctgatcagggttatgtcgagacgttcttcggccgccgcctg
tacttgccggacatcaactccaataagccccaagagcgcgcagcggcagaacgtaccgcg
atcaatgcgccgatgcagggcacagcggcggacattatcaagaaagccatggtgcgggtg
gacaattggctgaccgactcaggcttggatgccaaggtgatcctgcaggtgcacgatgaa
ctggtgctggaggtgcgtgaggacctggtagcgcaagtcagcgagaagattcgcgagcac
atgagcgctgccgcgcagttggatgtgccgctgctggtggaggtgggcgtgggcaacaac
tgggacgaagcgcactga
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