Pseudomonas sp. NS1(2017): CI807_12300
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Entry
CI807_12300 CDS
T11105
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI807_12300
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psns02000
]
CI807_12300
Transporters [BR:
psns02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CI807_12300
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GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ASV36931
UniProt:
A0A223VNL6
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Position
2592718..2593893
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AA seq
391 aa
AA seq
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MITLRVLGTSVTLLECLRVRAEQELGIRLIYQVHDVEQAQRIAVMQPESYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSPDDRLGSGSVPSERLFVQHDGSLGSTV
TDRISMLPLTHNADSFAYRPERLPEGFCHGNESWGWLLDPAWRARTALQSDAAIGALDAA
LAVQGAGLASFRDIGNMSIEEIDVLADILVRKQKEGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAKGAVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARSRDHLSSAEWDYWYAGKPAREELLGSDGLPLIDVGEVRDGGAYEA
RMGHIAVWNSVMDEHNYLVRRWGDFMRARCV
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatcactctgcgcgtcctcggcacctccgttaccctgcttgaatgcctgcgcgtccgc
gccgagcaggagctgggcattcgactgatctaccaagtgcacgatgtcgagcaggcccag
cgcatcgcggtgatgcagcctgagagctacgacctgtacgaccaatggttccacaacgtc
gacttcgtgtggccagcccgggcgatccagcccatcgacacccggcgcattgcgctgtgg
cacgagatcaatgacctgcccaagcgtgggcgcctgtcgcccgatgaccgactgggcagc
ggcagcgtgcccagcgaacggttgttcgtgcagcacgacggcagcctcggcagcacggtc
accgatcgcatcagtatgttgcccctgacccacaacgccgacagtttcgcctaccggccc
gaacgcttgcccgaaggtttttgccacggtaacgaaagctggggctggctgttggacccc
gcctggcgtgcgcgcacggccttgcagagtgacgcggcgattggtgcgttggatgctgca
ttggcggtgcagggcgcggggctggccagtttcagggacatcggcaatatgagcatcgaa
gagatcgacgtgttggccgacatcctggtgcgcaagcagaaggaggggcactttgcggcg
ttctggtctgatgatgaagaagcggcgcaattgatgctcagcccgagtatcgatattcag
agcctgtggtcgccgactttgatgcgcctgcatcgtgcgggggtgaaataccgcttggcg
gtgccgcgtgaagggtatcgcgcgtggtttggtgggttgtcgttgtcgcggcatgcgaag
ggggcggtgttggatgcggcctatgcgtatttgaattggtggttgtcggggtggccaggg
gcggtgatggcgcgccagggttattacattggcaacccggcgcggagtcgggatcacttg
agcagtgcggagtgggattactggtatgccggcaagcctgctcgggaggagttgctgggg
agtgatgggttgccgttgattgatgtgggggaggtgcgggatgggggggcttatgaggcg
cgcatggggcacattgcggtgtggaattctgtgatggatgagcataattatctggtgcgg
cggtggggggattttatgcgggctcggtgtgtttga
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