Pseudomonas sp. NS1(2017): CI807_13660
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Entry
CI807_13660 CDS
T11105
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psns03021
]
CI807_13660
Transcription machinery [BR:
psns03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
CI807_13660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
ASV37187
LinkDB
All DBs
Position
complement(2895156..2898002)
Genome browser
AA seq
948 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPG
DSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEQVTLPETQLSNFIQFRLASDRLFAGQI
DPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLHIAREVADRIAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEEKASPEYALVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLQAFRAESENYRPVAEAVQELLDK
GRLSPAAHKTIQGFLGNEGEALLTAVNDGDTEASARLVRELLDRHGTGRVLFRNTRAAVQ
GFPERKLHAYPLPNPDEYLELPLGEHAELYPEVSFQSQPDIEEENRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGA
QVLICSEIGSEGRNFQFSHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSP
QERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALIDEARAERERLE
EELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGN
TAVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSSRVSF
VTLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPQHAERVAEAKRRLAADTDEEL
ARLTALQAVNPTVRDSELVALRTQREQGLAMLDKAALRLEAIRVLVAG
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtatcaaccggggcaacgctggattagtgacagcgaagcagagctgggg
ttaggcaccgttctggcacaggacgggcgcttgttgaccgtgctctatccggccactggc
gacacccgccagtatgcgctacggaatgcgcccctcactcgcgtgaggttttcgccgggt
gacagcatcacccacttcgaaggctggaaaatgaccgtacaggaagtcgacgacgtcgac
ggcctgctggtgtaccacggcctcaatgggcagaacgagcaggtcaccctgccggaaacc
caactgtccaatttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgctggcctggttctcgctgcgctaccacaccctggaacacaccagccgccaattg
cagtcctcgctgtggggcctgggcggcgtgcgtgcgcaacctattgctcaccagttacac
attgcccgtgaagtcgctgaccgtatcgcgccacgggtcttgctggccgacgaagtgggc
ctgggtaaaaccatcgaagccggtctggtgatccatcgccaactgctgtcgggccgcgcc
aaccgcgtgctgatcctggtgccggaaaacctgcagcaccaatggctggtggaaatgcgc
cgccgcttcaacctgcaggtggcgctgttcgacgaagagcgcttcatcgaaagtgatgcc
accaacccgttcgaagacacccagcttgcgctggtcgccctggaatggctggtggacgac
gaaaaggcccaggacgcactgttcgctgccggctgggacttgctggtggtcgacgaagcc
caccacctggtctggcacgaagaaaaggccagcccggaatacgcactggtcgagcaactg
gctgaagtgattcctggcgtattgctgctgaccgccacccccgagcaattgggccaggac
agtcacttcgcacgcctgcgcctgctcgacccaaaccgtttccacgacctgcaagccttc
cgcgccgagagcgagaactatcgcccggtcgccgaagccgtgcaggagctgctcgacaag
gggcgtctctccccggccgcgcacaagaccattcagggtttcctcggtaacgaaggtgaa
gccctgctgaccgccgtcaacgatggcgacaccgaagccagcgcacgcctggtgcgtgag
ctgctcgaccgtcacggcactggccgcgtgctgttccgcaacacgcgcgccgccgtgcaa
ggtttcccggagcgcaagctgcacgcctacccgctgccaaacccggacgaatacctcgag
ttgccgctgggcgaacacgccgagttgtacccggaagtcagcttccagtcgcaaccggac
atcgaagaagaaaaccgctggtggcgcttcgatccgcgcgtcgagtggctgatcgaccag
ctcaaaatgctcaagcgcaccaaggtcctggtgatctgcgcccacgccgaaaccgcgatg
gacctggaagacgccttgcgcgtgcgctccggtattccggccacggtgttccacgaaggc
atgaacatcctcgaacgtgaccgcgccgctgcctactttgccgatgaagaattcggcgcc
caagtgctgatctgctcggaaatcggcagtgaaggccgcaacttccagttctcccaccac
ttggtgctgttcgatctgccgtcccaccccgatttgctggaacagcgcatcggccgtctg
gaccggatcggccagaaacacgtgatcgaactgcacgtgccgtacctggaaaccagcccg
caagagcgtctgttccagtggtaccacgaagcgctcaacgccttcctcaacacctgcccg
accggcaacgccctgcagcatcagttcggcccacgcctgctgccgctgctggagaacgcc
gacgacggcgagtggcaagccctgatcgacgaggcccgtgccgagcgcgagcgtcttgaa
gaagagctgcacactggtcgcgaccgcctgctggaactcaactccggcggcgccggcgaa
ggtgatgcgctggtcgaggacatcctggagcaagacgaccagttcgccctgccgatctac
atggaaaccctgttcgacgcctttggcatcgacagcgaagaccattcggaaaacgcgctg
atcctcaagcccagcgaaaagatgctcgacgccagcttccccctgggtgacgacgaaggt
gtgaccatcacctacgaccgcaaccaggcgctgtcgcgcgaagacatgcagttcatcacc
tgggaacacccgatggtgcagggcggcatggacctggtgctgtccggttccatgggcaac
accgccgtggcgctgatcaagaacaaggcgctgaagcctggcaccgtgttgctggaactg
ctctacgtcagcgaagtggtcgccccgcgctcgctgcaactgggccgctacctgccgccg
gccgccctgcgctgcttgctggatgccaatggcaacgacctgtcgagccgcgtgtcattc
gtgaccctcaacgaccagttggaaagcgtgccgagggccagcgccaacaagttcatccag
gcccaacgcgaccagttgacgccacggatcaacgccggtgaagagaagatcaccccacaa
catgccgagcgcgtggccgaggccaagcgtcgcctggcggcggacaccgacgaagaactg
gcgcgcctgaccgcgttgcaagcggtcaacccgaccgtgcgtgacagtgagctggtcgcc
ctgcgcacccaacgtgagcaaggcttggccatgctggataaggcggcgctgcgactggaa
gcgattcgggtgttggtcgcgggctaa
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