Pseudomonas sp. NS1(2017): CI807_14095
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Entry
CI807_14095 CDS
T11105
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CI807_14095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_14095
Enzymes [BR:
psns01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CI807_14095
DNA repair and recombination proteins [BR:
psns03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CI807_14095
Prokaryotic type
CI807_14095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ASV37270
LinkDB
All DBs
Position
2980254..2980946
Genome browser
AA seq
230 aa
AA seq
DB search
MTEDDRIKLEPSWKHALRDQFEQPYMAQLREFLRQEHAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYKELKRDLNIDIPNHGYLQSWA
DQGVLMLNTTMTVERANANAHAGKGWQFFTDRIIEVVSEHQPHLVFLLWGAHAQGKQKLI
DATKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQNGETPIDWVLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagacgaccgtatcaaactcgaacccagctggaagcacgccctgcgggatcag
ttcgagcagccgtacatggcccagctgcgcgagttcctgcgccaggaacatgccgccggc
aaagagatctacccgccgggcccgctgattttcaacgcgctcaattccacaccgctggac
aaggtgaaagtcgtgatcctcggccaggacccgtaccacggccccggccaggcccacggc
ctgtgcttctcggtgcaaccgggcgtgccggcgccgccgtcgctggtcaatatctacaaa
gagctcaagcgcgacctgaacatcgacatccccaaccacggctacctgcaaagctgggcc
gaccagggcgtgctgatgctcaacaccaccatgaccgtcgagcgcgccaatgccaacgcc
catgcgggcaagggctggcagttctttaccgaccgcattatcgaggtggtcagcgagcac
cagccgcatctggtgtttttgctgtggggcgcccatgcccaaggcaagcagaagctgatc
gatgcgaccaagcatctggtattgacctcggtgcacccgtcgccgttgtcggcgtaccgc
gggtttttggggtgcgggcatttcagccggaccaacaagtttcttgagcaaaatggcgag
acgccgattgattgggttttgccacctgtctga
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