Pseudomonas sp. NS1(2017): CI807_14630
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Entry
CI807_14630 CDS
T11105
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns00071
Fatty acid degradation
psns00280
Valine, leucine and isoleucine degradation
psns00310
Lysine degradation
psns00362
Benzoate degradation
psns00380
Tryptophan metabolism
psns00410
beta-Alanine metabolism
psns00640
Propanoate metabolism
psns00650
Butanoate metabolism
psns00907
Pinene, camphor and geraniol degradation
psns00930
Caprolactam degradation
psns01100
Metabolic pathways
psns01110
Biosynthesis of secondary metabolites
psns01120
Microbial metabolism in diverse environments
psns01200
Carbon metabolism
psns01212
Fatty acid metabolism
Module
psns_M00087
beta-Oxidation
psns_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CI807_14630 (fadB)
00650 Butanoate metabolism
CI807_14630 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CI807_14630 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CI807_14630 (fadB)
00310 Lysine degradation
CI807_14630 (fadB)
00380 Tryptophan metabolism
CI807_14630 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CI807_14630 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CI807_14630 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CI807_14630 (fadB)
00930 Caprolactam degradation
CI807_14630 (fadB)
Enzymes [BR:
psns01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CI807_14630 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CI807_14630 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CI807_14630 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CI807_14630 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASV37367
LinkDB
All DBs
Position
3095495..3097642
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDAELVAGNLEANKIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMSATAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAIEWIAAGKENRAEDAL
KVGAVDAVVAPEKLAEAALNLIKGAISGEFDYKAKRQPKLEKLKLNAIEQMMSFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTSAAQSLIGLFLNDQEL
KKKAKAYDEIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTAAKMAEVLNGIRPTLSYGDFGHVDLVVEAVVENPKVKQAVLAEVEAQVK
DDTILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSELAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVADPSVHEVLAPVIYEQREVSDEDIINWMMIALCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADQYADLGPLYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaactg
aaattcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaatgaattg
cgtcaggccgtagacaccatcaaagcagatgcttcggtcaagggcgtgatcgtttccagc
ggcaaggacgtgttcatcgtcggcgctgacatcaccgaattcgtcgacaacttcaagctg
cccgatgccgagctggtggctggcaacctcgaagccaacaagattttcagcgattttgaa
gacctcaacgtaccgaccgtcgccgcgatcaacggtatcgcgttgggcggcggcctggaa
atgtgcctggcggcagacttccgcgtcatgtcggccacggccaagatcggcctgcctgaa
gtcaagctgggcatctacccaggttttggcggtaccgtgcgcctgccgcgcctgatcggt
gccgacaacgccatcgagtggattgccgctggcaaggaaaaccgtgctgaagacgcgctg
aaagtcggtgctgtcgacgctgtggttgccccggaaaaactggccgaagccgcattgaac
ctgatcaagggcgccatcagcggcgaatttgactacaaggccaagcgtcagccgaagctg
gaaaaactcaagctcaacgccatcgaacaaatgatgtcgtttgaaaccgccaaaggtttc
gtggctggccaggccggtccgaactacccggcaccagttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgcgacaaagctctggaagtggaagcggctggcttcgtcaaa
ctggcgaaaacctccgcagcccagagcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaggccaaggcctacgacgaaatcgccaaggacgtgaaacaggctgccgtactc
ggcgccggtatcatgggcggcggtatcgcctatcagtcggcgtccaaaggcacgccgatc
ctgatgaaagacatcaacgagcacggcatcgagcaaggtctggcagaagccgccaagctg
ctggtcggccgcgtggacaaaggtcgcatgaccgccgcgaagatggctgaagtgcttaac
ggcattcgtcctacgctgtcctacggcgatttcggccacgtcgacctggtggtcgaagcg
gttgtcgagaacccgaaggtcaagcaagccgtactggccgaagtggaagcccaggttaaa
gacgacaccatcctggcgtccaacacctcgaccatttccatctcgctgctggccaaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagtgagctggccgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtggac
tttgtgcgcatcgacaaagtcatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgtcgctcggcgatcgacgcgctgtacgaggccaagcgc
ctgggccagaagaacggcaagggcttctacgcctacgaggccgacaagaagggcaagcag
aagaaagtggccgacccgtcggtgcacgaagtgctggctccggtcatctacgaacagcgt
gaggtgtcggacgaggacatcatcaactggatgatgatcgccctgtgcctggaaaccgta
cgttgcctggaagacggcatcgtcgagaccgccgccgaagccgatatgggcctggtgtac
ggtattggtttccctccattccgtggtggtgcgctgcgttacatcgattcgatcggtgtg
gccgagttcgttgccctggctgatcaatacgctgatttgggcccgctgtaccacccgacc
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcggttaa
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