Pseudomonas sp. NS1(2017): CI807_16220
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Entry
CI807_16220 CDS
T11105
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns00061
Fatty acid biosynthesis
psns00071
Fatty acid degradation
psns01100
Metabolic pathways
psns01212
Fatty acid metabolism
psns02024
Quorum sensing
psns04146
Peroxisome
Module
psns_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CI807_16220
00071 Fatty acid degradation
CI807_16220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CI807_16220
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI807_16220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psns01004
]
CI807_16220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psns04147
]
CI807_16220
Enzymes [BR:
psns01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CI807_16220
Lipid biosynthesis proteins [BR:
psns01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CI807_16220
Exosome [BR:
psns04147
]
Exosomal proteins
Exosomal proteins of breast milk
CI807_16220
Exosomal proteins of breast cancer cells
CI807_16220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
DUF5397
Motif
Other DBs
NCBI-ProteinID:
ASV37669
UniProt:
A0A223VS38
LinkDB
All DBs
Position
3410435..3412084
Genome browser
AA seq
549 aa
AA seq
DB search
MPVAFRLPLQVFYEREARHPRKTFLVQPVGGGQVQSLSWGDVGHQARCGAQWLRARELPQ
GSHIALISKNCAHWIIADLAIWMAGHVSVPLYPNLTADSVAHVLTHSEAALVIIGKLDDW
PAMAPGVPKDVPTISLPLCPSGEFDFSWADLQACSPIQDDPAPAVSDLATIIYTSGTTGL
PKGVMHSFGALGFSATRGTELFGLGEGDRLLSYLPLCHVAERMFVEMASIYTGQTVFFAE
SLETFLTDLRRARPTALFGVPRIWTKFQMGVYARIPAKRLDTLLRLPFIGKRVGHKVLAG
LGLDALRIALSGAAPVPEALLRWYQRLGLDVLEVYGMTESCGYSHVCRPGQQTLGWIGLP
CPGVEVRIDPAGEVQVRSGATMLGYYKDPQKTAETITADGFLRTGDKGEQDAKGRLRLTG
RLKEIFKTCKGKYVAPAPIENRLAEHARIEQVCVVGEGLIAPIALCVLSDGGEDSPALRA
SLERWLEQVNQALDKPERLRQLVVVKDSWAVENGFLTPTLKIKRNVIESTYGAHFQTWSE
RSETVLWQD
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgcttttcgtttgccgttgcaagtcttctacgaacgtgaagcgcgacatccg
cgcaaaacttttctggtgcagccggtgggtggtggccaggtgcaaagcctcagctggggc
gacgtcggccaccaggcccgctgcggcgcgcagtggctgcgcgcccgtgagttgccccag
ggctcgcacatagcgctgatctcgaaaaactgcgcccactggatcattgcggacttggcg
atctggatggccgggcatgtctcggtgccgctgtatcccaatctcaccgctgattccgtc
gcccatgtgctcacccattccgaggcggcgctggtgattatcggcaagcttgatgactgg
ccggccatggcgcccggtgtgcctaaggatgtgccgactatcagcctgcccttatgcccg
tcgggcgagttcgatttcagttgggccgacctgcaagcctgttctccgatccaggatgac
ccagcaccggctgtctcggacctggcgaccattatctatacctcaggcaccaccggcctg
cccaaaggcgtgatgcacagcttcggcgcgctagggttttccgccacccgtggtacggag
ttgtttggcctgggcgagggcgaccggttgctgtcttacctgccactgtgccatgtggcg
gagcggatgtttgtcgagatggcgtcgatctacaccgggcaaacggtgtttttcgccgaa
agcctggagacgtttctgacggatctgcgtagggcacgtccgaccgctctgtttggtgta
ccgcgtatctggaccaaattccagatgggcgtctacgccaggattcccgcaaagcgcctg
gacaccttgttgcgcctgcccttcatcggtaagcgtgtgggccacaaggtacttgccggc
ttgggcctggacgcgttgcgtatcgctctttcgggagcggcgcctgtgcctgaggcgttg
ctgcgctggtatcaacgcctgggcctggacgtgcttgaggtgtatggcatgaccgagagt
tgcggctactcccatgtctgccgccccggccagcagaccctcggttggatcggcttgccg
tgcccgggtgtggaagtgcgcatcgacccggcgggtgaagtgcaggtgcgcagcggcgcg
acgatgctcggctactataaggacccgcagaaaaccgccgaaaccatcaccgccgatggc
tttctgcgcacgggggacaaaggcgagcaggacgccaaggggcgtttgcgcctgaccggg
cggctcaaggaaatcttcaagacctgcaaaggcaaatacgtggccccggcgccgattgaa
aaccgcctggccgagcatgcgcgtatcgagcaggtgtgtgtggtgggcgagggactgatc
gcgccgatagctttgtgcgtgttatcggatgggggtgaggactcgccagccctgcgtgcc
agcctggagcgctggttggagcaggtcaaccaggcactggataagcctgaacgcctgcgc
caattggtggtggtcaaagatagctgggcggtggaaaacggctttctgacgccgaccttg
aagatcaaacgcaacgtgatcgaatcgacttacggtgcacatttccaaacctggagcgag
cgttccgaaacggttctgtggcaggattag
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