Pseudomonas sp. NS1(2017): CI807_16595
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Entry
CI807_16595 CDS
T11105
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CI807_16595
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psns02000
]
CI807_16595
Transporters [BR:
psns02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
CI807_16595
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
TOBE_2
SMC_N
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_25
nSTAND1
AAA_16
AAA_29
nSTAND3
AAA
AAA_23
AAA_5
NACHT
Rad17
ORC-CDC6-like
nSTAND_NTPase5
NB-ARC
ATPase_2
AAA_19
AAA_18
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ASV37729
LinkDB
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Position
complement(3486790..3487779)
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AA seq
329 aa
AA seq
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MSFVSVQHLQKGYAGTPVFSDINCEIAKGEFVTLLGPSGCGKSTLLRCIAGLTSVDSGKI
LLDGQDIVPLSPQKRHIGMVFQSYALFPNMTVEQNVAFGLRMQKVNADDSYKRVQEVLQL
VELKDLAGRYPHQMSGGQCQRVALARSLVTRPRLLLLDEPLSALDARIRKHLREQIRQIQ
RELGLTTIFVTHDQEEALTMSDRIFLMNQGKIVQSGDAETLYTAPVDVFAAGFIGNYNLL
DADKATQLLQRPINSRIAIRPEAIELSRDGELDALVRSHSLLGNVIRYRIEARGVELVVD
VLNRSADDLHPDGQRLALSIDPSALCEVA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgtcagcgtccaacacctgcaaaaaggctacgccggcactccggtgttcagt
gatatcaactgcgagatcgccaagggtgagttcgtcaccctgctcggcccgtccggttgc
ggcaaatccacactgctgcgctgcatcgccgggctgacctcggtggacagtgggaaaatc
ctgctggatgggcaggacatcgtcccattgagcccgcagaaacgtcacatcggcatggtg
ttccagagctatgcactgttccccaacatgaccgtggagcagaacgtcgccttcggcctg
cgcatgcagaaggtcaatgccgacgacagctacaagcgcgtgcaggaagtgctgcaactg
gtggaactcaaggacctggccggtcgttacccgcaccagatgtccggcggccagtgccag
cgcgtggccctcgcccgctccctggtcacccgcccgcgtctgttgttgctggatgagccg
ctgtcggcgctggatgcacgcattcgcaagcacctgcgcgaacagatccgccagatccag
cgtgaactggggctgaccaccatcttcgtgacccatgaccaggaagaagccctgaccatg
tccgaccggatcttcctgatgaaccagggcaagatcgtgcagagcggcgatgccgagacc
ctctataccgcgcctgtcgatgtgttcgccgccggttttatcggcaactacaacctgctg
gacgccgacaaggccacccagttgctgcaacgcccgatcaacagccgcatcgccattcgc
ccggaggccatcgaactgagccgcgacggcgaactggacgccttggtgcgcagccacagc
ctgctgggcaacgtgattcgctatcgcatcgaagcacgcggcgtggagctggtggtggat
gtgctcaaccgctcggccgacgacctgcacccagacggacaacgcctggcactttccatc
gaccccagcgccctgtgtgaagtagcctga
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