Pseudomonas sp. NS1(2017): CI807_16795
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Entry
CI807_16795 CDS
T11105
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns00550
Peptidoglycan biosynthesis
psns01100
Metabolic pathways
psns01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CI807_16795 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CI807_16795 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psns01011
]
CI807_16795 (mrdA)
Enzymes [BR:
psns01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CI807_16795 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psns01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CI807_16795 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ASV37768
UniProt:
A0A223VRX2
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Position
3522257..3524149
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AA seq
630 aa
AA seq
DB search
MPEPIPIKDHEKENRLVNKRLLACALLVIGITCALVGRMYFLQVVQFDYHSTISENNRVH
VLPITPTRGLIYDRNGVVLADNRPSYNLTITRERTTDLKGELDAIVSLLHLPAEDRAVFD
KALKQARHPFVPVTLFYELTEEQIALLAVNEFRLPGVDVEPQFVRHYPLGAHFAHSIGYV
GRINEKESKALDSVEYRGTQSIGKTGIERFYESELHGHVGYEEVETNAQGRVLRVLKHTD
PIPGKNIVLSLDVHLQEAAEEALGDRRGSVVALDPQTGEVLAMVSKPSFDPNLFVTGISF
KEYAALHDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDSGVVTAQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYLAEFGLGQKVSLDMFE
ESAGLMPSQAWKRATRRQPWFPGETVILGIGQGYMQVTPLQLAQATALIANKGVWNRPHL
AKTINGVPPVDENPMPNVVLKDPRDWEQVNHGMQLVMHDPRGIARAAAQGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIVISVMIENGEAGGRVAGPVVR
QIMDAWLLDQEGHLKPQYATPAKAPGDPKV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacccataccgatcaaagatcacgaaaaagagaaccgcctggtcaacaagcgc
ctgctcgcctgtgcgctgttggtgattggcattacctgcgcgctagtggggcgcatgtac
ttcctgcaggtcgtacagttcgactatcactcgacgatttctgaaaacaaccgtgtccac
gtgttgccgatcactcccacgcgcgggttgatctatgaccgtaacggtgtggtactggcc
gacaaccgccccagctacaacctgaccatcacccgcgaacgcaccaccgacctcaagggg
gagttggacgctatcgtcagcttgctgcacctgcctgccgaagatcgcgctgtcttcgac
aaggcgctgaagcaggcacgccatccctttgtccctgtgaccttgttttacgagttgacc
gaagagcagatcgcgctgctggccgtgaacgagttccgcctcccaggtgtagacgtagaa
ccgcagttcgtccgccattacccgttgggcgctcactttgcgcactccatcggttacgta
ggccggatcaacgagaaagaatccaaagccctcgattccgtggagtaccgcggcacgcag
tccatcggcaagaccggtatcgagcgcttctacgaatccgagctgcatggccacgtcggc
tatgaagaagtcgagaccaacgcccaaggccgcgtgcttcgtgttcttaagcacaccgac
ccgatccccggcaaaaacatcgtgctgagtctcgatgtgcatcttcaagaagcggcagaa
gaagccttgggggatcgccgtggttcggtggttgcactggatccccaaaccggtgaagta
ctggccatggtcagcaagccaagtttcgatccgaacttgtttgtcaccggtatcagcttc
aaggaatacgccgcgctgcacgattctatcgaccggccgctgttcaaccgtgtattacgc
gggctctacgcgccaggctcgaccatcaagccggaagtcgccatcgccggcctggacagt
ggtgttgtcactgctcaaacccgcgtgttcgaccctggctactaccagttgccagacttt
gaccacaaataccgcaactggaaccacagcggcgacggttgggtagacatggacgcggcc
atcatgcgctccaacgacacctatttttacgacctggcccacaagctgggcatcgatcgc
ctgcacgactatctggctgagttcggcctgggccagaaggtctcgttggacatgttcgaa
gagtccgccggcctgatgccttcccaggcctggaagcgtgccacgcgtcgccaaccctgg
tttccgggtgaaacggtgatccttggcatcggccagggctacatgcaggtcacaccgctg
caactggcccaagccaccgcactgattgccaacaaaggcgtgtggaaccgaccgcatttg
gccaagaccatcaacggcgtgccgccggtggatgaaaacccgatgccgaacgtggtcctc
aaggacccacgtgattgggaacaggtcaatcacggcatgcaactggtgatgcacgatccg
cgcggcatcgcccgtgctgccgcacaaggcgcgcaataccgcattgccggcaagagtggt
acggcgcaagtggtagcgatcaagcagggcgagcgctacaaccgagagaagaccctggag
cgccatcgcgacaacgccctgttcgtcggcttcgcgccggccgaacacccgaaaatcgtg
atttcggtgatgatcgaaaacggcgaggccggcggccgcgtggcaggcccggtggtacgc
cagatcatggacgcctggctgctcgaccaggaaggccatctgaaaccccaatatgcgacg
ccagccaaagcgcccggcgatcccaaggtgtga
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