Pseudomonas sp. NS1(2017): CI807_18065
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Entry
CI807_18065 CDS
T11105
Name
(GenBank) type VI secretion system-associated protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CI807_18065
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psns02044
]
CI807_18065
Secretion system [BR:
psns02044
]
Type VI secretion system
Imp/Vas secretion system core components
CI807_18065
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
ASV38006
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Position
3799377..3800708
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AA seq
443 aa
AA seq
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MFWNNKVVWSEGMLLQPQHLQQHDRFLQTQLEARVSALRAYGWGFAKLEIDPQQLAMGKL
SLLSFSGVLPDGTPVGLPFGDEMPLPLEIPVDARDLKVVLALPSLRPGVSEVDDNPSFEN
FARHRSSEYEAWDSNGLDSSALMSIGKLRLRLAFEGDVADAYTTLGIAHVVEKRADKSVV
LDREYCPPCLDMRAAERLGAFVDELLGLVQQRVEALASRLTQPDGSGAAEIADFLLLQVL
NRSLPLVRHLAAMTGLHPEQLYRDLASLAGELATFTREDKRAAAYPAYRHAALAETFAPV
MRDLRRALSTVMDARAIAIPLEERQYGIRVAVLPDQDLLRSATFILAVQAQMSAESVRNG
FPPQVKIGSVEKIRDLVNLQLPGIGLRPLPVAPRQLPFHAGFTYFELDRSSEYWQLLSQS
AGFALHIAGVFPGLDMQFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgttctggaataacaaagtcgtctggtccgaaggcatgctgttgcagcctcagcacctg
caacaacatgaccgtttcctgcagacccaattggaagcccgcgtcagtgccttgcgtgct
tacgggtggggctttgccaagctggaaatcgacccgcagcagttggccatgggcaagttg
tccttgctttccttcagcggcgtgttgcctgacggcacgccggtagggctgccctttggt
gatgaaatgccgttgcccctggagatccccgtcgacgcccgtgacctgaaagtggtgctc
gcgctgcccagcctgcgccccggggtgtcggaggtggacgacaaccccagctttgaaaac
ttcgcccgtcaccgcagtagcgaatacgaagcctgggacagtaacggcctggacagcagc
gcgttgatgagcatcggcaaactgcgcctgcgcctggcgttcgaaggcgatgtggcggat
gcctacaccaccctgggcatcgcccatgtggtggaaaagcgtgccgacaaaagcgtggtg
ctcgaccgcgaatactgcccgccatgcctggacatgcgcgccgccgaacgcctgggtgcg
tttgtcgatgagttgctgggcctggtgcagcaacgggtcgaggcgctggcgtcgcgcctg
acccaacccgacggcagcggcgcagcagaaatcgccgacttcctgttgttacaggtgctc
aatcgcagcctgccgttggtgcgccacttggccgcgatgaccggtttgcatcccgagcag
ttgtaccgcgacctcgcgagcctggccggtgaattggcgacttttacccgcgaggataag
cgcgccgctgcctacccggcgtaccgccatgcggcgctggcggaaaccttcgccccggtg
atgcgcgacctgcgccgcgcgctgtcgacagtgatggatgcgcgcgccatcgccatccct
ctggaagaacgccagtacggcattcgcgtggcagtgctgcctgaccaggacctgctgcgt
tcggccaccttcatcctggcggtgcaggcgcagatgtccgccgagagcgtgcgcaacggc
ttcccgccgcaggtcaagatcggctcggtggaaaagatccgcgacctggtcaacctgcaa
ctgccgggcatcggtctgcgccccttgccggtggcgccacggcagttgccgttccacgcc
gggtttacctatttcgaactcgatcgcagcagcgaatattggcaattgctgagccagtcg
gccggctttgccctgcatatcgccggggtgttcccggggctggacatgcagttctgggcg
atccgcaactaa
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