KEGG   Pseudomonas sp. NS1(2017): CI807_22320
Entry
CI807_22320       CDS       T11105                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psns  Pseudomonas sp. NS1(2017)
Pathway
psns00740  Riboflavin metabolism
psns01100  Metabolic pathways
psns01110  Biosynthesis of secondary metabolites
psns01240  Biosynthesis of cofactors
psns02024  Quorum sensing
Module
psns_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psns00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    CI807_22320 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CI807_22320 (ribD)
Enzymes [BR:psns01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     CI807_22320 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     CI807_22320 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: ASV40639
UniProt: A0A223W0E3
LinkDB
Position
4788651..4789751
AA seq 366 aa
MALALALADRGAYTTAPNPRVGCVIVKHDEVLGQGWHARAGQAHAEVNALREAGDQARGA
TAYVTLEPCGGHGRTPPCVDALIHAGIARVVVASVDRSQHENHGVERLRAAGVVVEHLPS
PEARELNQGFFSRIERQRPWVRIKLAMSLDGRTALATGESKWITSAQSRDDVQTWRARSC
AVLTGSGTLHADNPHLTVRLADPQTAFVAPLRVVLDQDLKGPTDAHVWDGEAPTLIFHGP
AVTPQGVPPDSVRFRQVGLSDGRLDLHQVMACLAEEGCNEVQVEAGAVLCGALAAAGLVD
EWLIYIAPLLLGSDARPLLGINGFTSLAEARQLSIVEQCQVGGDLRLRLKPLGGESALSA
VVEEAI
NT seq 1101 nt   +upstreamnt  +downstreamnt
atggcgctcgccctggcattggccgatcgaggcgcctacaccacggcgcctaatcccagg
gttggttgcgtgattgtcaagcacgacgaagtgcttggccagggttggcatgcaagggca
gggcaggcacacgccgaggtcaatgcgttgcgcgaagcgggcgatcaggcgcggggtgcc
actgcctatgtcacgctggaaccctgcggtggtcatgggcgtaccccgccctgtgtcgat
gcgttgatccatgcaggtatagcgcgggtggtggtcgccagtgtcgaccgctcccagcac
gagaatcatggcgtcgaacggctcagggcggcgggggtggtggttgaacacctgccgagc
cccgaggcgcgggagttgaaccaaggcttcttttcacgcatcgagcgtcagcggccctgg
gtgcggatcaagttggccatgagcctggacgggcgcacagccctggccacaggggagtcc
aagtggatcacctcggcgcagtcccgggacgacgtgcaaacctggcgcgccagatcctgc
gccgtactcacaggcagcggcacgctgcacgcggacaacccgcatttgacggtgcgcttg
gcggatccgcagacggcgtttgttgcgccgctgcgggtggtgctggaccaggatctcaaa
ggccccaccgatgcccatgtatgggatggcgaggcgcccaccctgatctttcatggcccg
gccgtcacaccacagggcgtgccgccagacagcgtgcgctttcgccaggttgggttgtcg
gacgggcgcctggacctgcatcaggtcatggcatgcctggcggaggaggggtgcaacgaa
gtccaggtcgaagccggagcggtgttgtgcggcgctttagcggctgcgggcctggtggat
gagtggctgatctatatcgcccccctgttgttgggcagtgatgcccgcccattgctggga
atcaatgggttcacgtcattggccgaggcccggcaattgtcgattgtggagcaatgccag
gtgggtggagacctgcgcctgcggttaaaacccctaggcggtgagtcagcgttatcggct
gtcgttgaagaggcaatatag

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