KEGG   Pseudomonas sp. NS1(2017): CI807_24240
Entry
CI807_24240       CDS       T11105                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psns  Pseudomonas sp. NS1(2017)
Pathway
psns00300  Lysine biosynthesis
psns00470  D-Amino acid metabolism
psns01100  Metabolic pathways
psns01110  Biosynthesis of secondary metabolites
psns01120  Microbial metabolism in diverse environments
psns01230  Biosynthesis of amino acids
Module
psns_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psns00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CI807_24240 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CI807_24240 (dapF)
Enzymes [BR:psns01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CI807_24240 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: ASV39185
LinkDB
Position
complement(5210753..5211556)
AA seq 267 aa
MPLPFVKMHAHGDDFIIIDRRGLDDPITAKIARQLGNRHTGIGFNQLAVILDCDDAAARI
KFWNPNGTPLATCGSATRGVADRLMHEAGMDSVVLRTDRGLLMCTRAAGRQVSVNMGEPS
LDWSAVPLAESMDTRTLSIDGNPAACSMGNPHCTFFVENIAAVDVAALGPVLEIHPLFPA
KTNVHFVQVLDRGHIRLRIWERGGGVPLGSGSCCCGAVVNGIRRGLLDDTVEVQCDGGTV
TVHWAGEGGVVLTGSVEPVMQGSAYVG
NT seq 804 nt   +upstreamnt  +downstreamnt
atgcccttgccatttgtgaaaatgcacgcccatggcgacgatttcatcatcatcgaccgc
cgaggcctggacgatccgatcaccgcgaaaatcgcccgtcaactcggcaaccgccacacc
ggtattggcttcaaccaactggcggtgatactcgattgtgacgacgccgccgcgcgcatc
aagttctggaaccccaacggcacgccgctggccacctgcggcagcgccacccgtggcgtg
gccgatcgcttgatgcatgaggcgggcatggactcggtggtgctgcgtaccgaccgtggc
ttgctgatgtgtacgcgggcagcggggcggcaagtgtcggtgaacatgggcgagccgtcg
ctggattggtcggccgtgccgttggccgagtccatggacacccgtaccttgtccatcgac
ggcaatccggcggcgtgcagcatgggcaacccgcattgcacgttttttgtggaaaacatc
gcggctgtcgatgtggcggccttgggcccggtgctggaaattcacccgttgttcccggcc
aagaccaatgtgcattttgtgcaggtgcttgaccgaggccatatccgcctgcgcatctgg
gagcgcggcggcggtgtgccgttgggctcgggttcctgttgctgtggcgcggtggtcaat
gggattcgacgaggattgctggacgataccgtcgaagtgcaatgcgacggcggcacggtg
accgtgcactgggcgggcgagggcggtgtggtgctgaccggcagcgtagagccggtgatg
cagggcagcgcctacgttggttga

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