Pseudomonas sp. NS1(2017): CI807_25045
Help
Entry
CI807_25045 CDS
T11105
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psns03000
]
CI807_25045
Transcription factors [BR:
psns03000
]
Prokaryotic type
Helix-turn-helix
Other families
CI807_25045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_8
AAA
AAA_2
Mg_chelatase
HTH_50
PAS_4
MCM
PAS_7
ATPase
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ASV39336
LinkDB
All DBs
Position
complement(5370514..5372475)
Genome browser
AA seq
653 aa
AA seq
DB search
MSMAFSVQDLDYLTALGPAALNDGPVAALEQAWRDCLAGQIERPMHVRQVIWDSWRRSVQ
AGIDPADNAYRFVAADTLAATQAAHRVLIEAAAQVMHGLLAYNPRGHINLTDVDGTTLYF
CGLDITPVGSRLLESVQGTNCTGLALAEDRLVYVLAEENFGVGLRQRRMHCAAAPIKNAQ
GQTVAMLTLTAEPGWFHFHTLGTVQAAADAVSRQMALQGLLEEQQTVLEVLNEGLVVLDE
RGCIKALNRYARQLFGVGLELIGRPFQQLGRSELNDVLGEPVRDLDCTFHLHNRSQLACL
VSVCPLEQGGVIVSLRENRRIREITRRLIGTQASYTFDTIQGSSRAIQDALHLGRIASRS
DSTTLILGESGTGKELFAQAIHNGSERCNGPFVAVNCGAIPRDLVQSELFGHVEGAFTGA
SRGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEITRVGAKNSRQVNVRIIAA
THRNLSQAVAEGAFREDLYYRLNVLNLTVPPLRMRREDIALLARHFLARCARSLRKSVQG
FSPEAMALLSAYGWPGNVRELENSIERATNLAMGELIEPVDLPLESRQRTPLRAHEAPPA
QDLSSHEMHAIVAALNSTGGNIRLAARQLNVSRGGLYNKMSRFGLNAGDFRRN
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgagcatggcgttcagcgtgcaagacctcgactacctcacggccctggggcctgccgcg
ctgaatgatggcccggttgccgcactggaacaggcctggcgcgactgcctggccggccag
atcgaacgcccgatgcacgtgcgtcaagtgatctgggattcttggcggcgcagcgtccag
gccggtatcgacccggccgacaacgcgtaccgcttcgttgccgccgacacgctggcggcc
acccaggccgcacaccgggtgctgatcgaggccgccgcgcaggtcatgcatggcttgctg
gcctacaacccgcgcggccatatcaacctcaccgatgtcgacggtactaccctgtatttc
tgtgggctggacatcactccggtgggcagtcgcctgctggaatcggtgcaaggcaccaac
tgcaccggcctggcgctggccgaggatcgcctggtgtacgtgttggccgaggaaaacttc
ggcgtcggcctgcgccagcgccgcatgcattgcgccgccgcgccgatcaagaatgcccag
ggccagaccgtggccatgctgacgctgaccgccgagcccggctggtttcacttccatacc
ctcggcacggtgcaggctgcggccgacgcggtatcgcggcagatggccctgcaagggctg
ctggaagaacagcagactgtcctcgaagtgctcaacgaaggcctggtggtgctcgacgaa
cgcggctgcatcaaggcgctcaaccgctatgccaggcagctgtttggcgtcgggctggag
ctgatcgggcggcctttccagcaactgggccgtagcgaactgaacgacgtccttggcgaa
cccgtgcgcgacctcgactgcaccttccacctgcacaaccgcagccaactcgcctgcctg
gtctcggtgtgcccgctggagcagggcggggtgatcgtgtcactgcgcgagaaccgccgt
atccgcgaaatcacccggcgactcatcggcacccaggccagctacaccttcgacaccatc
cagggcagctcgcgagcgatccaggacgcgctgcatttggggcgcatcgccagccgcagc
gattccaccaccctgatccttggcgaaagcggcaccggcaaggagctgttcgcccaggcc
atccacaatggcagcgagcgctgcaacggcccgtttgtggcggtcaactgcggtgcgatt
ccacgggacctggtgcaaagcgagctgttcggccacgtcgaaggcgcgttcaccggcgcc
agccgtggcggctcggcgggcaagttcgaactggcggatggcggcaccatctttctcgat
gagattggcgacatgtccttcgatgcccaggtcagcctgctgcgggtgttgcaggagggt
gaaatcactcgggtgggcgcgaaaaactcgcggcaagtgaacgtgcgcatcatcgccgcc
acccaccgcaacctcagccaggcggtcgcggaaggcgcgtttcgtgaagacctctactac
cgcctcaacgtgctgaacctgaccgtgccaccgctgcgcatgcgccgtgaagacattgcg
ctgctggcgcggcattttctcgcccgctgcgcgcgctcgttgcgtaaatcggtgcagggc
ttttcgccggaggcgatggcgctgctgtcagcctatggctggccgggcaatgtgcgcgag
ctggagaacagcatcgaacgggcgaccaacctggcgatgggagagctgatcgaaccggtg
gatctgcctttggaaagccgccaacgcaccccgctgcgcgcccacgaagcgccgcctgcc
caggacctgagcagccacgaaatgcacgccatcgtcgccgcgctcaacagcaccggcggt
aacatccgtctggctgcgcggcagctcaacgtgtcgcggggtgggctgtacaacaagatg
agtcggtttggcctgaatgccggggatttccgtcgcaactga
DBGET
integrated database retrieval system
