Pseudomonas sp. NS1(2017): CI807_27050
Help
Entry
CI807_27050 CDS
T11105
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psns03016
]
CI807_27050
Enzymes [BR:
psns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CI807_27050
Transfer RNA biogenesis [BR:
psns03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CI807_27050
Prokaryotic type
CI807_27050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ASV39712
LinkDB
All DBs
Position
complement(5790458..5791282)
Genome browser
AA seq
274 aa
AA seq
DB search
MAAAGFYRIALGVEYKGSRYRGWQRQASGVLTVQETLEKALSKVADSPVSLMCAGRTDAG
VHACGQVVHFDTQAERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVI
YNDQIRPAHLNEEITWNHRPLDAERMAEAAQHLVGVHDFSAFRAGQCQAKSPIKEVHHLR
VTRHGKMIVLDIRAGAFLHHMVRNIAGVLMTIGTGERPVEWAREVLESRVRRTGGVTAHP
FGLYLVDVEYRDEFELPERFIGPHFLTGFSELGG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaggcttttaccgcatcgccctgggcgtggaatacaaaggctcgcgctat
cgcggctggcagcgtcaggcgtccggcgtactgacggtgcaggaaaccctggagaaagct
ctgtcgaaagtcgctgattcgccagtgtcgctgatgtgcgccgggcgtaccgatgcaggc
gtgcacgcctgtggccaggtggtgcacttcgacacccaggctgagcggtccatgaaggcc
tgggtgatgggtgctaatatcaatttgccccacgacgtcagcgtcagctgggccaaggtc
atgcctgcgcactttcatgcgcgcttcaaggccatcgcccggcgttatcgctatgtgatc
tacaacgaccagatccgtccggcgcacctcaacgaagaaatcacctggaaccaccgcccg
ctcgacgccgagcgcatggccgaggctgcgcagcatctggtcggcgtgcatgatttcagc
gcattccgtgccggccagtgccaggccaagtcgccgatcaaggaagtccatcacctgcgc
gtgacccgtcacggcaagatgatcgtgttggatatccgtgcgggtgcgttcctgcaccat
atggttcgaaacattgccggggtgctgatgaccatcggcaccggcgagcgcccggtggag
tgggccagggaagtgctggaaagccgcgtccgccgtacgggtggggtcacggcgcacccg
ttcggcctgtacctggtggatgtggagtatcgcgacgagttcgaattgccggaacgtttc
atcgggccacacttcctcacaggtttcagcgaacttggcggctga
DBGET
integrated database retrieval system
