Pseudomonas sp. NS1(2017): CI807_27150
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Entry
CI807_27150 CDS
T11105
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CI807_27150 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_27150 (uvrB)
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CI807_27150 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CI807_27150 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
HAMP
AAA_30
Cauli_AT
Motif
Other DBs
NCBI-ProteinID:
ASV39729
LinkDB
All DBs
Position
complement(5814687..5816702)
Genome browser
AA seq
671 aa
AA seq
DB search
MSDFQLVTRFEPAGDQPEAIRQMVEGIEAGLAHQTLLGVTGSGKTFSIANVIAQINRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRELLRRLTSLQY
TRNDMDFARATFRVRGDVIDIYPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLMGAIEGIKVELAERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRESGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEAISPQTIFVSATPGNYEAEHAGRVIEQLVRPTGLVDPE
IEIRPALTQVDDLLSEITKRVALEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIGETQRRRDKQIAFNLENGITPKGVFKDVADIMEGATV
PGSRSKKRKGMAKAAEESAKYENELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQTRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatttccagctcgtcacccgctttgaacccgccggcgatcaaccggaagccatt
cgccagatggtcgaaggcatcgaagccgggctggcgcaccagaccctgctcggggtgacc
ggctcgggcaagaccttcagcattgccaacgtgattgcgcagatcaaccggcccaccctg
gtgctggcgccgaacaagaccctggccgcgcagctgtacggcgagttcaaggcgttcttc
ccgaacaacgcggtggagtatttcgtttcctactacgactactatcagcccgaagcctac
gtgccgtcctccgacacctttatcgagaaggatgcgtcgatcaatgaccacatcgagcag
atgcggctgtcggcgaccaaggccttgctggagcgcaaggacgcgatcatcgtcaccacc
gtgtcgtgcatctacggtctgggcagcccggaaacctatctgaagatggtgctgcacgtc
gatcgcggcgacaaactcgaccagcgcgaactgctgcgccgcctgaccagcctgcaatac
acgcgcaatgacatggactttgcccgcgccaccttccgcgtgcgcggcgatgtgatcgac
atctacccggcggaatccgacctggaagcgatccgcatcgagctgttcgacgatgaagtc
gagagcctgtcggccttcgacccgttgaccggtgaggtgatccgcaaactgccgcgcttc
accttctatccgaaaagccactacgtgaccccgcgtgaaaccctgatgggcgccattgag
ggcatcaaagtcgagttggccgagcgcctggagtacctgcgttccaacaacaagctggtg
gaagcccagcgcctggagcagcgtacccgtttcgacctggagatgatcctggagctgggc
tactgcaacggtatcgaaaactactcgcgctacctgtcgggtcgcgaatccggtgcgccg
ccgccgacgctttacgattacctgccgcctgatgcgctgctggtgatcgacgagtcccac
gtcagcgtgccgcaagtgggtgcgatgtataagggcgaccgttcgcgtaaggaaaccctg
gtggagtacggtttccgcctgccgtcggccctggataaccggccgatgcgctttgacgag
tgggaagccatcagcccgcagaccatcttcgtgtccgccacgccgggtaactatgaggcc
gagcatgccggccgcgtgatcgagcagttggtgcggccgacgggcctggtggatccggaa
atcgaaatccgcccggcgctgacccaagtcgacgacttgctctcggaaatcaccaagcgt
gtggccctggaagagcgggtgctggtcaccacgctgaccaagcgcatgtccgaagacttg
accgactacctggccgatcacggcgtgcgcgtgcgctacctgcactcggacatcgacacc
gtggagcgcgtggagatcatccgcgacctgcgcctgggcacctttgatgtgctggtgggc
atcaacctgctgcgtgaaggcctggacatgccggaagtatcgttggtagcgatccttgat
gcggacaaggagggcttcctgcgctccgaacgctcgctgatccagaccattggccgtgcg
gcacgcaacctcaatggccgggcgattctctatgcggaccgcattaccggctccatggaa
cgggcgattggtgagacgcagcgccgtcgcgacaagcagatcgccttcaacctcgaaaat
ggcatcacgcccaagggcgtgttcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggctcgcgcagcaagaagcgcaagggcatggccaaggctgccgaggaaagcgccaag
tacgagaacgaattgcgctcgccgagcgagatcaccaagcgcatccgccagttggaagag
aagatgtaccagttggcgcgggacctggagttcgaggcggcggcgcagacgcgcgatgag
atcggcaagttgcgcgagcgcctgctggcggtctaa
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