Pseudomonas sp. NS1(2017): CI807_27345
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Entry
CI807_27345 CDS
T11105
Name
(GenBank) TIGR03752 family integrating conjugative element protein
Organism
psns Pseudomonas sp. NS1(2017)
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Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
YabA
DUF3450
Mod_r
Motif
Other DBs
NCBI-ProteinID:
ASV39765
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Position
5863713..5865194
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AA seq
493 aa
AA seq
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MKSNGLLKWLVLVLVLLVVLGTFKACSSKTPSSSADKLTAPQLTQDEMKQLGIEGDTPHD
TVATLVAQTKAMRTELKTLLSDNKSQQEENARLRQRDSEIDQRIQQALNVELDKAESKGP
RRLNEQETQSLLDEIKQRLSTDLLNNRNTDLPIGLGLQPGDGDQFPKGQSDLIWIDPQDA
TAVDAQGKPIPSGTKKPASGFNFPDAFNDEINRGQRELKASTGAVGRNIKTTDEKDTARP
VYTLPENSTLTGSITMTALIGRVPVDGVVNDPYPFKVLIGPDNLTANGIDLPDVAGAVIS
GTAAGDWTLSCVRGQISSMTFVFNDGRIRTVPTPQKLTNRQSSGQTSSAQLDKIQGGIGW
LSDPYGIPCISGERRSNAEQYLGTKSLITSAGAGVAKLLGADQQVSNTLFSASGAPVGTG
TAGSDAVSTILSGGVKDIGDWVNNLYGQAFAAIYVQPGAQVAVHLDRQLEIDYETLGRKV
RHTSGGAHVSALD
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtaatgggctgctcaagtggttagttctggtgctggtattgctggtggtttta
ggcaccttcaaagcttgctccagcaaaacgccctcatcatcggccgacaaactgaccgct
cctcaactgacacaggatgagatgaaacagctgggcattgaaggcgataccccacacgac
actgtggcgaccttggttgcccagaccaaagccatgcgcacagagttgaaaacgctgctt
tcggataacaagagtcagcaagaagaaaacgctcgactacgccaacgtgacagtgagatt
gatcagcgtattcagcaggcgctgaacgttgagttggataaggctgaatccaaaggacca
cgtcgtttgaacgagcaagaaactcagagcctgctcgatgagatcaagcaacgcctctcc
accgaccttttgaataaccgcaacactgacctccccattggcctgggattgcaaccggga
gatggcgatcagttccctaaaggccaaagcgatctgatctggatcgatcctcaggatgca
accgcggtcgatgcacaaggtaaacctatacccagtggcaccaagaagcccgcctccgga
ttcaatttcccggatgcgttcaacgatgagatcaatcgagggcagcgcgagctgaaagca
agcaccggcgcggtcgggcgaaatatcaaaacgaccgacgaaaaggacaccgccaggcct
gtctataccctgcctgagaacagcaccctcactggctccatcacaatgaccgctctgatc
ggtcgagtacctgtcgatggtgtggtaaacgacccctaccccttcaaggtcctcatcggc
cccgacaatctgactgctaacggcatagatctacccgacgttgcaggagcggttatcagc
ggtacggctgctggtgattggacgctgtcctgcgtgcgcggacagatctccagcatgacc
tttgtatttaacgacgggcgtatccgcacggtgcccactccgcagaagctgactaaccgt
caaagctccggacaaaccagcagcgctcaactggacaagatccagggcggcattggttgg
ctcagtgatccttacggcattccctgcatttcgggggagcggcgctccaacgcagaacag
tacctgggtaccaaaagcctgatcacctccgccggcgccggcgttgccaaattgctgggg
gctgatcaacaggtctcaaacacgctcttcagcgcaagcggagcacctgtgggtaccggg
accgccggtagcgatgcggtcagcaccatcctctcgggtggcgtgaaggacattggcgac
tgggtcaacaatctctacggccaagcctttgcagccatctacgtgcaacccggcgcacaa
gtggctgtgcacctggaccggcaattggaaattgactacgaaaccttgggccgcaaggtt
cggcacacttctggaggtgcacatgtatccgcgctcgattaa
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