Pseudomonas sp. NS1(2017): CI807_28325
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Entry
CI807_28325 CDS
T11105
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns02020
Two-component system
psns02025
Biofilm formation - Pseudomonas aeruginosa
psns02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CI807_28325
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
CI807_28325
09142 Cell motility
02040 Flagellar assembly
CI807_28325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psns03000
]
CI807_28325
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psns02035
]
CI807_28325
Transcription factors [BR:
psns03000
]
Prokaryotic type
Helix-turn-helix
Other families
CI807_28325
Bacterial motility proteins [BR:
psns02035
]
Flagellar system
Flagellar assembly proteins
Others
CI807_28325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
GAAD
bpMoxR
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ASV39948
UniProt:
A0A223VY54
LinkDB
All DBs
Position
complement(6103229..6104704)
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AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVSSLSSSREVICVLIGTV
NAPGAVLGLLKTLSTWDEFLPVLLMGDISSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDGPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEVGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQLVDSLRSDMEERVAINGHAPD
FSNTAMLPPEGLDLKDYLGNLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRKEGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgattgatgacgatagcgtccgccgccgcgattta
gcggtgattttgaattttcttggcgaagaaaatctgccctgcggcagccatgattggcag
caggcggtcagctcattgtcatcgagccgtgaagtcatttgtgtgctgatcgggacggta
aacgctcctggcgctgttttgggcctgttaaagacactgtcaacctgggatgagttcctt
cccgtgttgctgatgggcgatatttcttccgtcgacctgcccgaagaccagcgccgccgg
gtgctttctaccctggaaatgccccccagctacagcaaattgctcgattccctgcaccgc
gcccaggtctatcgcgagatgtacgaccaggcccgcgagcgcggccgtcaccgcgaaccc
aacctgttccgcagcctggtcggcaccagccgcgccatccagcacgtacgccagatgatg
cagcaagtggccgacaccgatgccagcgtgctgattctcggcgagtccggcaccggcaag
gaagtggtcgcgcgcaacctgcactatcactcaaagcgccgcgacgggccatttgtgccg
gtcaactgcggggcgatcccggcagaactgcttgaaagcgaactgttcggccacgagaag
ggcgcctttaccggggcgatcaccagccgtgccgggcgtttcgagttggccaacggcggc
acgctgttcctcgatgaaatcggcgacatgccgctgccaatgcaggtcaagctgctgcgc
gtgttgcaggaacgtaccttcgagcgcgtgggcagcaacaagacccagagcgtcgatgtg
cgcatcatcgcagccacccacaagaacctcgaaagcatgatcgaggtcggcagcttccgc
gaagacctgtactaccgcctcaacgtattcccgatcgagatggccccgctgcgcgagcgc
gtggaagacatcccgctgctgatgaacgaactgatctcacgcatggaacacgaaaagcgt
ggttcgatccgtttcaactctgccgcgatcatgtccctgtgccgccacggctggccgggc
aacgtgcgggagctggccaacctggtggagcgcatggcgatcatgcacccctacggtgtg
atcggcgtggtcgagctgccgaagaaattccgctacgtcgacgacgaagacgaacaactg
gtcgacagcctgcgcagcgacatggaagaacgcgttgccatcaacggtcatgcccctgac
ttcagcaacaccgcgatgctgccgcccgaaggcctggacctgaaggactacctcggcaac
ctggaacaaggcctgatccaacaggccctggacgacgccaacggcattgtcgcccgtgcc
gccgagcgcctgcgcatccgtcgcaccaccctggtggagaagatgcgcaagtacggcatg
agccgcaaagaaggtgatgaacaggcggatgattga
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