Pseudomonas sp. NS1(2017): CI807_28455
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Entry
CI807_28455 CDS
T11105
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CI807_28455 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psns03019
]
CI807_28455 (recQ)
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_28455 (recQ)
Enzymes [BR:
psns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CI807_28455 (recQ)
Messenger RNA biogenesis [BR:
psns03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CI807_28455 (recQ)
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CI807_28455 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
HTH_23
GerE
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ASV39974
UniProt:
A0A223VX66
LinkDB
All DBs
Position
complement(6131194..6133320)
Genome browser
AA seq
708 aa
AA seq
DB search
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLRNGLA
VVVSPLIALMDDQVATLEELGVAAASLNSTLSAEQQRDLAARIKRGEVKMLYLAPERLVQ
PRMLAFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPDVPRIALTATADKRT
REEIVERLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLSERRSDAGIVYCLSRKK
VDEVAAFLCEQGYPALPYHAGLPNDTRSAHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMVYGLQDVVMLKQMLQNSEGDERHKRLEQHK
LDAMLSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCTDGVQTWDATEPARQGLSAIYRTG
QRYGVGHLVDVLLGKDNEKVRSFGHEKLSVYGVGKARAEGEWRSLFRQMVARGLVDIDIE
GYGGLRLNDSCRPLLKGEVTLELRRDLKPQTTAKTSTSQASQLVRGEEREQWEALRTLRR
KLAQEHSVPPYVIFPDSTLLEMLREQPTTMSEMARVSGVGARKLERYGQAFLEVLGGQAE
APKEVADIRHELISLARAGMTPIQIAGQLQCSEKNVYTLLAESIGKQQLSLEQALDLPED
LLGEIQDAFLDGEGELPPVAEIAPLFTGRVPEGVLYCVRAALQSEFEI
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaacaggcacaacgcgtcctcaaggacatcttcggctacgacagttttcgtggc
cgccagggtgcgatcattgagcgcgtggccagtggcggtgacgccctggtactgatgcct
accggcggcggtaaatcgttgtgcttccaggtgccggcgctgttgcgcaatggcctggcc
gtggtggtgtcgcctttgattgcattgatggacgaccaggtggcaaccctggaagagctg
ggtgtcgccgccgcgtcgttgaactccaccctcagtgccgaacagcagcgtgacctcgcc
gctcgcatcaagcgcggtgaagtgaagatgctgtacctggcccccgagcgtctggtgcag
ccgcgcatgctggcttttttgcagagcctggaaatcgccctgttcgcgatcgatgaagct
cactgcgtgtcgcaatggggccatgactttcgtcgcgaatatttgcagcttggccaattg
gcggagctgtttcccgatgtgccgcgcattgccctgaccgccactgctgacaagcgtacc
cgcgaagaaatcgtcgagcgcctgcatctgcagaacgccgagcgcttcctgtcgagcttt
gaccgaccgaatattttctaccgtatcgtgcccaaggagcagccgcgcaaacagttgctg
gcgttcctttccgagcggcgcagcgatgcgggcatcgtctattgcctgtcgcgcaagaag
gtcgatgaagtggctgcgtttctctgcgagcaaggctatccggcgttgccgtatcacgcc
ggcctgcctaacgacacgcgttcggctcaccagaaacgcttcctcaacgaggaaggcctg
atcatggtcgccaccatcgcgttcggcatgggcatcgacaaatccaacgtgcgcttcgtt
gcgcacatggacctgcccaaatcccttgaggcgtactaccaggaaaccgggcgtgccggc
cgtgacggtttgccggcggatgcgtggatggtctacggcctgcaagacgtggtgatgctc
aagcagatgctgcagaactccgaaggcgacgagcgccacaagcgcctggaacagcacaaa
ctcgacgccatgctctcgctgtgcgaagagactcgctgccgccgccagaccttgctggcg
tatttcgacgaagacatgcccgaaccctgtggccactgtgataactgcaccgacggcgtg
cagacctgggacgccaccgagccggcgcgccagggtttgtccgccatctatcgcaccggg
cagcgttatggcgtcggtcacttggtggatgtgttgctgggcaaggacaacgagaaggta
cgcagcttcggccatgaaaaactctcggtctatggcgtcggcaaggcccgcgccgaaggc
gagtggcgctcgctgttccggcagatggtggcgcgcggcttggtggatatcgacatcgaa
gggtacggcggcctccgcttgaacgacagttgtcgtccgctgctcaagggtgaagtgacg
ctggagctgcgtcgtgacctcaagccgcagaccaccgccaagaccagcaccagccaggcc
agtcagcttgtacgtggcgaagaacgcgaacagtgggaagccctgcgcaccctgcgccgc
aaactggcccaggaacacagcgtgccgccgtacgttattttccccgactcgacgttgttg
gagatgttgcgcgagcaacctacgactatgtcggaaatggccagggttagcggcgtcggt
gcacgcaagttggagcgctacggccaggcgttcctcgaagtgctcggcgggcaggccgaa
gcaccgaaggaagtcgccgatattcgccacgaactgatcagcctggcacgtgctggcatg
accccgatccagatcgccggccagttgcaatgctcggagaagaacgtctacaccttgctt
gccgaatccatcggcaagcagcagttgtccctggaacaagcccttgatttgccggaggat
ctgctcggcgagatccaggatgctttcttggacggggagggcgaattgccacctgtggcg
gagattgctccgctgtttaccgggcgtgttcctgaaggtgttttgtactgcgtgcgggcg
gctttgcagtctgaattcgaaatttag
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