Pseudomonas sp. NS1(2017): CI807_29095
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Entry
CI807_29095 CDS
T11105
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psns Pseudomonas sp. NS1(2017)
Pathway
psns03030
DNA replication
psns03430
Mismatch repair
psns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CI807_29095
03430 Mismatch repair
CI807_29095
03440 Homologous recombination
CI807_29095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psns03032
]
CI807_29095
03400 DNA repair and recombination proteins [BR:
psns03400
]
CI807_29095
Enzymes [BR:
psns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CI807_29095
DNA replication proteins [BR:
psns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CI807_29095
DNA repair and recombination proteins [BR:
psns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CI807_29095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
ResIII
AAA_14
AAA_16
AAA_30
TIP49
AAA_18
PIF1
AAA_2
AAA_19
TsaE
nSTAND3
AAA_7
HasA
Rad17
SKI
Mg_chelatase
zf-CXXC
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
ASV40091
UniProt:
A0A223VXJ4
LinkDB
All DBs
Position
complement(6261009..6263063)
Genome browser
AA seq
684 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGTCSVCKEIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVMAADVRAM
LGTLDHGQVFDVLHALIEGDAKALLEAVRHLSEQGPDWNGVLSEILNVLHRVAIAQALPE
GVDNGHGDRDRVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSADAPRQPLKPVGISQATVDSAKPVAGAAVVAPVVAAPAPAAPVPEPEPVVAAPVPEP
DPIVEPEPVVDLPWNDPVDAEVEVEQVPAVEPVLETTAEQPELTPMPTPTPDSVVPDAPE
WVSAPVPEPTVAQVEAATPGIDLDDEPPLDEDYIEPDMDSAYSYLDDLASEHTAEPVPEP
EAEPAAAPATGLALQWLELFPKLPISGMTGSIAANCTLISIDGDHWLLHLDPAHSALFNA
TQQRRLNDALNQYHERTLTITIELIKPEQETPAQAATRRRINRQREAEDSIHGDPLIQQM
MQQFGAVVRHDTIEPVEAPVPQAS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccttggacagccagcggctgcaccacgcc
tacctgttcaccggtacgcggggggtgggcaagaccaccattgcgcgcatcatcgccaaa
tgcctgaactgtgaaacgggtatcacttcaacgccgtgcggcacctgttccgtgtgcaag
gagatcgacgaagggcgctttgtcgacctgatcgagatcgacgccgcgagccgtaccaag
gtcgaagacacccgcgagctgctcgacaacgtgcagtacgcgccgagccgtggccgcttc
aaggtctacctgatcgacgaagtgcacatgctctccagccattccttcaacgccctgttg
aaaaccctggaagagccgccgccctacgtcaaattcatcctggccaccaccgacccgcag
aaacttcctgcaacgattctgtcgcggtgtttgcagttctccctgaaaaacatgaccccc
gagcgggtggtcgagcatttgacccatgtgctgggcgtcgagaacgtaccgttcgaagac
gacgcgctgtggctgctcggccgcgctgccgatggctcgatgcgtgatgccatgagcctc
accgaccaggccatcgcctttggcgaaggcaaggtcatggccgccgacgtgcgcgccatg
cttggcaccctcgaccacggccaggtattcgacgtgctgcatgcgctgatcgaaggcgac
gccaaggcgttgctcgaagccgtgcgtcacctgtcggagcaaggcccggactggaatggt
gtgctctcggaaatcctcaatgtgttgcaccgcgttgccatcgcccaggccctgcctgag
ggtgtcgacaacggccatggcgaccgcgaccgtgtattggccctggcccaggcgttgccg
gccgaagatgtacagttctactaccagatgggcctgatcggccgccgcgacctgcccctg
gcgcccgacccgcgtggtggcttcgaaatggtgctgttgcggatgttggcgttccggccc
gccgattcggccgatgcgccgagacagccgctaaagccagtggggatcagccaggccaca
gttgattccgccaaaccagtggctggcgcagcggttgtcgcgccagtggttgctgcgcct
gcgccggccgctccggtgcccgagcctgagcctgtggtcgctgcgccggtgcccgagccg
gatcccattgtcgaacctgaaccggtcgtagacctgccttggaatgacccggtagacgct
gaagtcgaagtcgagcaagtgcccgccgtggagcccgtgctggaaaccaccgccgagcag
cccgagctgaccccgatgcccacgccgaccccggacagtgtggtgccggacgcgcctgaa
tgggtgtccgcgccggttcccgagccgaccgtggcccaggtggaagccgccacgccgggc
atcgacctcgacgacgagccgccgctggacgaggactacatcgagccggacatggattcg
gcttacagctacctggacgacctggccagcgaacacaccgccgagccggtccctgaaccc
gaggcggaacccgctgccgcgccggccactggcctggccttgcaatggctggaattgttt
ccgaagctgccgatttccggcatgaccggtagcatcgccgccaactgcaccctgatttcc
attgacggcgatcactggttgttgcacctggacccggcccacagcgccctgttcaacgca
acccagcaacgtcgcctgaatgacgcactcaaccagtaccatgagcgtacgctgaccatt
accatcgagctgatcaagccggagcaggaaaccccggcccaggccgcgacccgccggcgt
atcaaccgccagcgtgaggccgaggactcgatccacggtgatccgctcatccagcaaatg
atgcaacagttcggtgcggtcgtccgtcacgatactattgaacctgtcgaagccccggtg
ccccaggcgtcctga
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