Pseudomonas sp. NS1(2017): CI807_30110
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Entry
CI807_30110 CDS
T11105
Name
(GenBank) TetR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
psns Pseudomonas sp. NS1(2017)
Brite
KEGG Orthology (KO) [BR:
psns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psns03000
]
CI807_30110
Transcription factors [BR:
psns03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
CI807_30110
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
HTH_22
HTH_36
HTH_11
CcdB
TetR_C_6
LacI
Motif
Other DBs
NCBI-ProteinID:
ASV40282
LinkDB
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Position
6478307..6478933
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AA seq
208 aa
AA seq
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MTAPQRLTDRKREAIVAAAIAEFRENGFEVTSMDKIAATAGVSKRTVYNHFPSKEELFAE
ILHQLWASSVAQLDVSYASDRPLREQLRGLLEAKMKMMADANFLDLARVAIAATIHSPER
AQDMVTRLSKREEGFTQWVRAAQDDGRLNCSDPAFAAHQIQSLLKAFAFWPQITLGQPVL
DAASQASVIESAIDLFLAGYEVTSPRQL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgactgccccacaacgcctcaccgaccgtaaacgcgaagccatcgtggctgcggccatc
gctgagtttcgcgaaaacggtttcgaggtgaccagcatggataagatcgccgccaccgcc
ggcgtttccaagcgcacggtgtacaaccacttccccagcaaagaagagttgttcgccgaa
attctccatcaactatgggccagcagcgttgcgcagctcgacgtcagctacgccagcgac
cgcccgctgcgcgaacaattgcgcggcttgctggaagcgaagatgaagatgatggcggat
gccaatttcctcgacctggcccgcgtcgccatcgccgccaccatccattcgccggagcgc
gcgcaagacatggttacccgtctgagcaagcgcgaagaaggttttacccaatgggtacgc
gccgcccaggacgatggccggctcaattgcagcgacccggcatttgccgcgcaccagatt
cagagcctgctcaaggcgtttgcattctggccgcagattaccctgggccaaccagtcctg
gacgccgccagtcaggccagtgttatcgagtcggctatcgacctgttcctggccggctac
gaagtcacgtcgccccggcagctgtaa
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