Pseudopelagicola sp. nBUS_20: ACMAZE_08965
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Entry
ACMAZE_08965 CDS
T12042
Name
(GenBank) efflux RND transporter permease subunit
Organism
psnu Pseudopelagicola sp. nBUS_20
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GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XXK39994
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Position
1946476..1949607
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AA seq
1043 aa
AA seq
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MFSSIFIARPKTSFVISLVLTIMGVIGYVALPVEQFPEITPPVVTVAANYTGANSETVEN
TVAAPIEAQVNGVDDMIYMSSDSTDTGSYQLSVTFEVGTDPDIASVNVQNRVAQGMSSLP
TEVTSSGVVTQKSSTNMLLIVTLSSPNKTYDEVFLSNYASINIKDALARVKGVGKADVMT
DFAYSMRMWMDPNRMAGLGLTPADLISAIREQNLEVSAGQVGTPPIPTGQQFQYTIKAQG
RLTTAREFENIVLRTGDAGSVVRVSDVARVELGSSNYSASGRFKGKPATVLAIYQAPGAN
ALAVADGVKAELTRLSTAFPDDVVYDIPFDSTLFVKQSLNDVITTLGQTFVLVIAVVFIF
LGSVRATIIPAVAIPVSLIGTFAFLLLFGMSLNTISLFALVLAIGIVVDDAIVVVENVER
IIAEEGLSPADATRKAMGQITGPVIATTLVLLAVFVPVTFMPGISGRLYSQFAVTISTAV
VISSINALTLSPALCSLILKRRAGPPKGVMATFEKGINGVRGGYVGIVRRLVRIPLIAVA
VLAAVILGSGTLMKALPAGFIPIEDNGYLFVDVQLPDAASLERTETVTERLNEKILNVPG
VEASVLVNGYSILSGAGSNSAMIIANLAPWNDRDTDALSAAGVLRNILGIARQEVGASVI
AFNPPPISGLGMSAGVEMKVQQTGGGTAQELAAAVGSMVYAANQRPELAQAYSTFRANVP
KVFVDLDREKAKSLNVAVSDVFLVLQAYMGSYYVNDFNLFGRVYRVMIQADGEYRDKIED
LNQLYVRSKSGEMVPLGTLITISNELGPVALNRYNMFRSATVTAMPSEGLSTGDAIKVLE
QVAATALPPGFSYEWTGTAQQQQAAGGLVVLILLLAVVFGYLFLVAQYESWTMPVGILLS
VSVAMFGALAAVKIAGGDVNLYTQIGMIMLIGLASKNAILIVEFAMERRASGLTIREAAV
EAAHQRFRAVMMTALSFLLGVVPLVIASGAGAASQQAIGIAVFGGMLSATILGVIIIPII
YVLLQSAREWIKGLGKPKSAQES
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctcaatatttatcgcacgcccgaagacgtcgtttgtcatatctcttgtcctc
accattatgggtgtcattggatacgttgcattgcccgtcgaacaatttccggaaattact
ccgccggttgtaacggtagcagccaactataccggcgcgaactcggaaactgtggaaaat
acagtcgcagcgccgatagaggcacaggttaatggagttgacgacatgatatatatgtcg
tcggacagcaccgatactgggtcataccagctgtctgtgacttttgaagttggcacagac
ccggatattgcatcagtaaatgtgcagaaccgcgtggcacaggggatgtcgtctcttcca
actgaagtgacgagttccggcgttgtcactcagaaaagctccaccaatatgcttctgatc
gtgacgttgtcgtcgcccaacaagacatacgacgaagtatttctgtcaaattatgcatcg
atcaacatcaaagatgcactagcgcgtgttaagggtgttggaaaagcggatgttatgacc
gatttcgcatactccatgcgcatgtggatggatccgaatcgtatggctgggttgggtttg
accccagctgaccttatttcggcgatccgcgaacaaaacttggaagtttcggcgggacag
gtgggtacaccaccaataccgaccgggcagcagttccaatacactatcaaagcccaaggt
cgtctcacgacagcgcgagaatttgaaaacattgttctacgaacaggtgatgcgggcagt
gtcgtgagggttagtgacgttgcgcgggttgaactgggatccagcaactacagtgcatcg
ggacgcttcaaaggcaagcccgcgacggtcctggcaatttatcaggctccgggtgccaac
gcattggcagttgcagatggtgtaaaggctgagctcacgcgactatcaacagcattcccg
gatgatgttgtctacgatattccgtttgattctacactcttcgtaaagcaatcgttgaat
gatgtgattaccacgcttgggcaaacatttgtcctagtgattgctgtcgtctttatcttc
ttgggtagcgtgcgcgcaacgatcattcctgcagttgccattcctgtgtcactgatcggc
acttttgctttcttgcttttatttggcatgtctctcaataccatttcgctctttgcactc
gttctggcaattggaattgtggtggatgatgcgattgtcgtggttgaaaatgtggagcgc
atcattgcggaggaggggctgtcaccggcggatgctacgcgcaaagctatggggcaaatt
actggaccagtgattgccacaacgttggtgttacttgccgtatttgttccggttaccttt
atgccgggtatctctggacggctatattcgcagtttgcagtcactatttcgacggcggtg
gttatctcctcaatcaacgctttgacattgtctcctgcattgtgctcgctgatcctcaag
cgacgcgctggccctcccaagggtgtaatggcaacgtttgaaaaaggaattaacggtgta
cgtggtgggtatgttggcatagttcggcgtttggtacgcatacccttgattgctgtggct
gtgttagctgcagtgattctaggcagtgggactttgatgaaagcgctgccagctggattt
attccaatcgaagacaatggctatttgtttgttgacgtgcagttgccggatgctgcttcg
ttggaacgcacagagaccgtaacagagcggctcaatgaaaaaatattgaatgtaccgggt
gttgaagccagcgttctcgtaaacggttacagtattttgagtggggcagggtcgaacagc
gcgatgataatcgcaaatctagcgccttggaatgatcgagatacagatgcgcttagcgct
gcaggtgttttgcggaacattcttggcatcgcacgtcaggaagttggcgcgagtgtaatt
gccttcaacccgccaccgatatccggattgggtatgagcgctggtgttgaaatgaaggtg
caacaaactggtggtggtactgcgcaggagctggccgctgcagttggatcgatggtatac
gccgcaaatcagagaccggagctagcgcaagcctattctacatttcgagcaaatgttccg
aaagtctttgttgatttagatcgggaaaaagcgaagtcgctaaatgttgcggtatcggat
gtctttctcgttttgcaagcttatatgggctcctattacgtgaatgatttcaatcttttt
ggtcgcgtttatcgcgtgatgatccaagctgacggcgaataccgggataagattgaagat
ctcaaccaactgtacgtgaggtcaaagagtggtgaaatggtgccgttgggtacgttgatc
acaattagtaacgaattgggaccggttgcgctcaatcgatataacatgtttaggtctgcg
accgtgaccgcgatgccatcggaggggctgtcaaccggtgatgcaataaaagttttggag
caggtggctgcaactgcgcttcctccagggttttcctatgagtggactggcacagcgcag
caacagcaagctgctggtggcctagtagttttgattttgcttttggcggtggtattcgga
tatttgttccttgtcgctcaatacgagagttggaccatgccagtaggcattttgctttcg
gtttcggttgcgatgttcggcgctctggctgcagtcaagatcgctggtggggacgtaaac
ctctacacacaaattgggatgataatgctgatcggtctggcctcaaagaatgcgatttta
attgtagaatttgcgatggagcggcgggctagtggtttgactattcgcgaggctgcagtt
gaagcagcgcatcagcgtttcagagcagtgatgatgacagctttatcattcctgttgggc
gttgtgcctttggtgattgcaagtggggctggagcggcttcgcaacaggcgattggtatc
gccgtatttggcggcatgttgtcagcaaccatcttaggtgtgataatcatcccgataatt
tacgttcttttgcaatcagcaagagaatggatcaaggggcttggtaagccaaagagtgct
caggaaagctga
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