Pseudomonas sp. NyZ201: ACPFMA_00370
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Entry
ACPFMA_00370 CDS
T11215
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03030
DNA replication
psny03410
Base excision repair
psny03420
Nucleotide excision repair
psny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPFMA_00370 (polA)
03410 Base excision repair
ACPFMA_00370 (polA)
03420 Nucleotide excision repair
ACPFMA_00370 (polA)
03440 Homologous recombination
ACPFMA_00370 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psny03032
]
ACPFMA_00370 (polA)
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_00370 (polA)
Enzymes [BR:
psny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPFMA_00370 (polA)
DNA replication proteins [BR:
psny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACPFMA_00370 (polA)
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACPFMA_00370 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPFMA_00370 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
XRQ38986
LinkDB
All DBs
Position
72818..75631
Genome browser
AA seq
937 aa
AA seq
DB search
MSQTPLVLVDGSSYLYRAFHALPPLTTSKGMPSGAVKGVLNMLRSLRKQYPDSPFAVVFD
AKGGTFRDEMFADYKANRPSMPDDMRVQIEPLHAAVRALGFPLLCVEGVEADDVIGTLAR
SSAAAARPVVVSTGDKDMAQLVDEHVTLVNTMTGTVLDIEGVKGKFGVAPEQIIDLLALM
GDTADNIPGVKGVGEKTAVGLLVGVNGGLKELYDNLDLVPSLPIRGAKTLPAKLLESKEM
AFLSYRLATIKCDVELDVGLDDLHLGEPDRDKLMELYTELEFKGWIDELEREARRAAQPA
PVAVLDVTVAAVSDEALVVAEVEVPVEPDYETILDQARFDAWLQKLKDAPLFAFDTETTG
IDAQQAQLVGVSFAVKAHEAAYVPLTHSYPDAPAQLDRDSVLLALKPLLEDPQKLKVGQH
AKFDMNILANCAIGGDPANGITVRGIAFDTMLESYVLNSTAIRHDMDSLAKKYLDYSTVK
FEDIAGKGAKQVTFDKIHLDKAGPYAAEDADVTLRLHQTLFAQLQAIPSLASVLTDIEMP
LVPVLARIERQGALVDPELLRLQSQELGDKMVELEREAIELAGEPFNLGSPRQLGAILYD
KFGLPVLKKTAKGQPSTAEEVLDELAEEGYPLPRVLMQYRSLSKLKSTYTDRLPEQINPR
TQRIHTSYGQAVAATGRLSSSDPNLQNIPARTAEGRRIRQAFIAPPGYKLLAADYSQIEL
RIMAHLSGDEGLMNAFRNGLDVHTATAAEVFNVALDQVTSDQRRSAKAINFGLIYGMGAK
KLGKDIGVETKQAKAYIDAYFARYPGVRQYMESTRKLAAEQGFVETLFGRRLYLPAINSS
RPMERAGAERTAINAPMQGTAADIIKRAMVAVDNWLESSGLDARVILQVHDELVLEVRED
LVEQVREDIRPYMSNAAQLDVPLVVDVGVGANWDEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacccccctcgtcctggtggacggttcttcgtacctctaccgtgccttccac
gcgctgccgccgctgaccacgtccaagggcatgccgtccggggctgtaaagggtgtgctg
aacatgctcaggagcctgcgcaagcaatatccggacagcccgttcgcggtggtcttcgat
gccaagggcggaacgttccgcgacgagatgttcgccgactacaaggccaaccgcccgagc
atgcccgacgacatgcgcgtgcagatcgaaccgctgcacgccgccgtgcgtgccctgggc
ttcccgctgctgtgcgtcgagggtgtcgaggccgatgacgtgatcggcaccctggcccgc
agcagcgctgcggcagcgcgcccggtggtggtgtccaccggcgacaaggacatggcgcag
ctggtggacgagcacgttacgctggtcaacaccatgaccggaaccgtgctggatatcgag
ggcgtaaaagggaaattcggtgtcgctccggaacagatcatcgacctgctggccctgatg
ggcgataccgccgacaacatcccgggggtcaagggtgtcggcgagaagactgccgtcggc
ttgctggtcggggtcaatggcggcctcaaggagctctacgacaacctcgacctggtgccg
tccctgcccatccgtggtgccaagaccctgccggccaagctgctggaaagcaaggaaatg
gccttcctctcctatcgcctggcgaccatcaagtgcgacgtcgaactggacgtcggcctg
gatgacctgcacctgggcgagccggatcgcgacaagctcatggagctctacaccgagctg
gagttcaagggctggatcgacgaactcgagcgcgaagcgcgccgtgccgcgcagccggcc
ccggtggcggtgctggatgtcaccgtggcggcggtcagcgacgaggcgctggtggtggcc
gaggtcgaggtgccggtcgagccggattacgagaccatcctcgaccaggcgcgtttcgat
gcctggttgcagaaactcaaggacgccccgctgttcgccttcgacaccgaaaccaccggc
atcgacgcgcagcaggcgcaactggtgggtgtgtcctttgcggtgaaagcccatgaggcg
gcgtatgtcccgctgacccacagttaccccgatgcccccgcgcaactggaccgcgacagc
gtgttgctggccctgaagccgctgctggaagacccgcaaaagctcaaggtcggccagcac
gccaagttcgacatgaacatcctcgccaactgcgcgatcggcggcgacccggccaacggc
atcaccgtgcgcggcatcgccttcgacaccatgctcgaatcctacgtgctcaactccacg
gcgatccgccacgatatggacagcctggcgaagaagtacctcgactacagcaccgtcaag
ttcgaagacatcgctggcaagggcgccaagcaggtgaccttcgacaagatccacctggac
aaggccggcccctacgccgccgaagacgccgacgtgaccctgcgcctgcaccagacgctg
ttcgcgcagctccaggcgatcccgtccctggccagcgtgctgaccgacatcgagatgccg
ctggtgccggtgctggcgcggatcgagcgccagggcgcgctggtcgatcccgaattgctg
aggctgcagagccaggagctgggcgacaagatggtcgagctggagcgcgaggccatcgaa
ctcgccggtgagccgttcaacctcggttcgccacgccagctaggcgcgatcctttacgac
aagttcggcctgccggtcttgaagaagaccgccaagggccagccctccactgccgaagag
gtgctggacgaactggccgaggaaggctatccgctgccacgggtgctgatgcagtaccgc
tcgctgagcaagctcaagagcacctacaccgaccgtctgcccgagcagatcaacccgcgc
acccagcgcatccatacgtcctatggccaggcggtcgcggccaccggtcgcctgtcgtcc
agcgatccgaacctgcagaacatcccggcccgcactgccgaggggcggcgcatccgccag
gcgttcatcgcgccaccgggctacaagctgctggcggccgactactcgcagatcgagttg
cgcatcatggcccacctgtccggcgacgaaggcctgatgaacgccttccgcaacggcctc
gacgtgcacaccgcgactgccgccgaagtgttcaacgtggccctggaccaagtgacttcc
gaccagcgccgcagcgccaaggcgatcaacttcggcctgatctatggcatgggcgcgaaa
aagctcggcaaggacatcggcgtcgagaccaagcaggccaaggcctatatcgatgcctac
ttcgcccgctacccgggtgtgcgccagtacatggaaagcacccgcaagctggccgccgag
caaggcttcgtggaaaccctgttcggtcgtcgcctgtacctgccggcgatcaactccagc
cgcccgatggagcgtgccggagctgaacgtacggcgatcaacgcgccgatgcagggtacc
gcggcggacatcatcaagcgcgccatggtcgcggtggacaactggctggaaagctccggg
ctcgatgcccgggtaattctccaggtacacgacgaactggtgctggaagtgcgcgaagac
ctggtggagcaggtgcgtgaggacattcgtccgtacatgagcaacgctgcgcaactggat
gttccgctggtggtggacgttggagtgggggcgaactgggacgaagcgcactga
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