Pseudomonas sp. NyZ201: ACPFMA_00785
Help
Entry
ACPFMA_00785 CDS
T11215
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00300
Lysine biosynthesis
psny00470
D-Amino acid metabolism
psny01100
Metabolic pathways
psny01110
Biosynthesis of secondary metabolites
psny01120
Microbial metabolism in diverse environments
psny01230
Biosynthesis of amino acids
Module
psny_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACPFMA_00785 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACPFMA_00785 (dapF)
Enzymes [BR:
psny01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACPFMA_00785 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
SPO11_like
Tail_completion_gp17
Motif
Other DBs
NCBI-ProteinID:
XRQ39060
LinkDB
All DBs
Position
complement(186437..187267)
Genome browser
AA seq
276 aa
AA seq
DB search
MLLRFTKMHGLGNDFMVLDLVSQHAHILPKHARQWGDRHTGVGFDQLLIVEAPSNPEVDF
RYRIFNADGSEVEQCGNGARCFARFVLDKRLTAKKRIRVETKGGIIELDVRNDGQICVDM
GPPRLAPTEIPFQAPAQALSYPLEVGGQTVELAAVSMGNPHAVLRVDDVNNAPVHDLGPQ
IENHPRFPQRVNVGFLQVVDRHRAQLRVWERGAGETQACGTGACAAAVAAISQGWMDSPL
LIDLPGGRLSIEWGGPGKPVLMTGPAVRVYEGQVRL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgcgttttaccaagatgcacggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatcctgcccaagcacgccaggcaatggggcgatcgccatacc
ggcgtgggcttcgaccagctgctgatcgtcgaggcgccgagcaacccggaagtggatttt
cgctaccgcatcttcaatgccgacggctccgaagtggagcaatgcggcaacggcgcgcgc
tgcttcgcccgcttcgtcctggacaagcgcctgaccgcgaagaaacgcatccgcgtggaa
accaagggcggcatcatcgagctggacgtgcgcaacgacgggcagatctgcgttgacatg
ggcccgccgcgcctggccccgacggaaatcccgttccaggcgccggcccaggccctgagc
tatccgctggaagtcggcgggcagaccgtcgagctggcggccgtctcgatgggcaatccc
cacgccgtattgcgcgtcgacgacgtcaacaacgcaccggtccacgatctcggcccgcag
atcgaaaaccacccgcgcttcccgcagcgggtcaacgtcggttttctccaggtcgtcgac
cgtcaccgcgcccagttgcgcgtctgggagcgcggcgccggggaaacccaggcctgcggt
accggcgcctgtgctgccgcagtggctgccatcagccagggctggatggactcgccgctg
ctgatcgacctgcccggcggacgcctgtccatcgagtggggcggcccgggcaaaccggtg
ctgatgaccggcccggcggtgcgggtctacgaaggacaggttcgtctatga
DBGET
integrated database retrieval system