Pseudomonas sp. NyZ201: ACPFMA_01870
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Entry
ACPFMA_01870 CDS
T11215
Symbol
choX
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ACPFMA_01870 (choX)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psny02000
]
ACPFMA_01870 (choX)
Transporters [BR:
psny02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
ACPFMA_01870 (choX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
DUF3325
Motif
Other DBs
NCBI-ProteinID:
XRQ39257
LinkDB
All DBs
Position
complement(420975..421916)
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AA seq
313 aa
AA seq
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MQSISRSLLMLVGTAVLSTNVMAADPAACKNVRLGVVNWTDVMATSAMTQVLLDGLGYQT
KQTSASQQIIFAGIRDQRLDMFLGYWNPIMTQTITPFVDAGQVKVLDAPSLNDARATLAV
PKYLADKGLKTFADIHKFEKELGGKIYGIEPGSGANTQIKAMIAKNQFGLGKFQLVESSE
AGMLAAVDRAVRRKEAVVFFGWAPHPMNVNIDMEYLSGSEGALGPDEGRATVWTVTAPDY
ASRCPNVSRLLTNLTFSAEDESRMMQPLLDHKDALESARQWLKDHPEDKARWLEGVTTLD
GKPAEENLKLTAN
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgatcagtcgttcgctcttgatgcttgtcggtaccgcagtcctcagcaccaac
gtaatggccgccgacccggccgcctgcaagaacgtgcgcctgggcgtcgtcaactggacc
gacgtgatggccaccagcgccatgacccaggtactgctcgacggcctcggctaccagacc
aagcagaccagcgcctcgcagcaaatcatcttcgccggtatccgcgaccagcgcctggac
atgttcctcggctactggaacccgatcatgacccagaccatcacgcccttcgtcgacgcc
ggccaggtcaaggtgctcgacgcacccagcctgaacgacgcccgggccaccctcgccgtg
ccgaagtacctggccgacaagggcctgaagaccttcgccgatatccataaattcgagaag
gaactgggcggcaagatctatggcatcgaaccgggctccggggccaatacccagatcaag
gcgatgatcgccaagaaccagttcggcctcggcaagttccagctggtggaatccagcgag
gccggcatgctcgccgccgtcgatcgcgccgtgcggcgcaaggaagcggtggtgttcttc
ggttgggcaccgcacccgatgaacgtgaatatcgatatggaatacctcagcggcagcgaa
ggcgcactcggcccggacgaaggtcgcgccacagtgtggacggtgaccgcgccggactat
gccagccgttgcccgaacgtgagccggctgctgaccaacctgaccttcagcgccgaagac
gagagccgcatgatgcagccgctgctggaccacaaggacgcgctggaatcggcgcgccag
tggctcaaggatcaccccgaggacaaggcgcgctggctcgagggtgtaaccaccctcgat
ggcaagccggctgaggagaacctcaagcttaccgccaactga
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