KEGG   Pseudomonas sp. NyZ201: ACPFMA_02265
Entry
ACPFMA_02265      CDS       T11215                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psny  Pseudomonas sp. NyZ201
Pathway
psny02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psny00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACPFMA_02265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psny03021]
    ACPFMA_02265
Transcription machinery [BR:psny03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACPFMA_02265
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 HTH_23 Rv2175c_wHTH HTH_24 Sigma70_ECF PhyR_sigma-like HTH_3 FaeA Sigma70_r3 HTH_11 HTH_17 TnsD MerR EutK_C HTH_7 GerE HTH_31 HTH_38
Other DBs
NCBI-ProteinID: XRQ39334
LinkDB
Position
complement(523275..523793)
AA seq 172 aa
MSSVPSPHSELVGALYRDHRSWLLAWLRRNLASAERAEDLSQDTFVRLLGRDELTAPRQP
RAFLMAVAKGLLFDHFRRTALEQAYLDELLLMPEAEHPSPEALHLILEDLKAIDRLLGKL
SSKARAAFLHSRLDGMSHAEIADRLGVSVARVRQYLAQGMRQCYIALYGEPT
NT seq 519 nt   +upstreamnt  +downstreamnt
ttgtcgtccgtacctagccctcacagcgagctggttggcgcactgtaccgcgatcaccgc
agctggctgctcgcctggctgcgccgcaacctcgccagcgccgaacgtgccgaagacctg
agccaggacaccttcgttcgtctgctcggccgcgacgagctgaccgccccgcgccagccg
cgggcgttcctgatggcggtggccaaagggctgctgttcgaccatttccgccgcaccgcg
ctggaacaggcctatctggacgaactgctgctgatgcccgaggccgagcacccgtctccg
gaagccctgcacctgatcctcgaagacctcaaggccatcgaccgtctgctcggcaagctg
tcgagcaaggcccgcgcggccttcctgcacagccgcctggacggcatgagccacgccgag
atcgccgacaggctcggcgtttcggtagcacgggtgcgccagtacctggcccagggcatg
cgccagtgctacatcgccctgtacggcgagccgacatga

DBGET integrated database retrieval system