Pseudomonas sp. NyZ201: ACPFMA_02265
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Entry
ACPFMA_02265 CDS
T11215
Name
(GenBank) RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPFMA_02265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psny03021
]
ACPFMA_02265
Transcription machinery [BR:
psny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPFMA_02265
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Rv2175c_wHTH
HTH_24
Sigma70_ECF
PhyR_sigma-like
HTH_3
FaeA
Sigma70_r3
HTH_11
HTH_17
TnsD
MerR
EutK_C
HTH_7
GerE
HTH_31
HTH_38
Motif
Other DBs
NCBI-ProteinID:
XRQ39334
LinkDB
All DBs
Position
complement(523275..523793)
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AA seq
172 aa
AA seq
DB search
MSSVPSPHSELVGALYRDHRSWLLAWLRRNLASAERAEDLSQDTFVRLLGRDELTAPRQP
RAFLMAVAKGLLFDHFRRTALEQAYLDELLLMPEAEHPSPEALHLILEDLKAIDRLLGKL
SSKARAAFLHSRLDGMSHAEIADRLGVSVARVRQYLAQGMRQCYIALYGEPT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtccgtacctagccctcacagcgagctggttggcgcactgtaccgcgatcaccgc
agctggctgctcgcctggctgcgccgcaacctcgccagcgccgaacgtgccgaagacctg
agccaggacaccttcgttcgtctgctcggccgcgacgagctgaccgccccgcgccagccg
cgggcgttcctgatggcggtggccaaagggctgctgttcgaccatttccgccgcaccgcg
ctggaacaggcctatctggacgaactgctgctgatgcccgaggccgagcacccgtctccg
gaagccctgcacctgatcctcgaagacctcaaggccatcgaccgtctgctcggcaagctg
tcgagcaaggcccgcgcggccttcctgcacagccgcctggacggcatgagccacgccgag
atcgccgacaggctcggcgtttcggtagcacgggtgcgccagtacctggcccagggcatg
cgccagtgctacatcgccctgtacggcgagccgacatga
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integrated database retrieval system