KEGG   Pseudomonas sp. NyZ201: ACPFMA_03250
Entry
ACPFMA_03250      CDS       T11215                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
psny  Pseudomonas sp. NyZ201
Pathway
psny00740  Riboflavin metabolism
psny01100  Metabolic pathways
psny01110  Biosynthesis of secondary metabolites
psny01240  Biosynthesis of cofactors
psny02024  Quorum sensing
Module
psny_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:psny00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    ACPFMA_03250 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ACPFMA_03250 (ribD)
Enzymes [BR:psny01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     ACPFMA_03250 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     ACPFMA_03250 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: XRQ39514
LinkDB
Position
721899..723029
AA seq 376 aa
MSTERAVLDAHYMARALELARKGLYSTHPNPRVGCVIVRDGRIVGEGWHVRAGEPHAEVH
ALREAGELARGACAYVTLEPCSHHGRTPPCAEALVKAGVSRVVAAMQDPNPQVAGNGLKR
LADAGIEVASGVLEAEARALNPGFLKRMEHRLPFVRVKLAMSLDGRTAMASGESQWITGP
AARSAVQRLRARSSVVLTSAASVIADNARMTVRGDELGLDPETTALALARPPLRVLIDGR
LRVPLDAPFFQAGAALVVTAAEDDPRYAAAGHQLLRIPGENGQVDLRQLLVELARRDINE
VLVEAGPGLAGAFARLGLIDEYQLFIAGRFLGSTARPLLDWPLARMSEAPALKIIEMRAV
GDDWRVTAVPAPAPGV
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgtccacagaacgcgccgtgctcgacgctcactacatggcccgcgcgctggagctggcg
cgcaagggcctgtattcgacccatccgaatccgcgggtaggctgcgtgatcgtgcgtgac
gggcgcatcgtcggcgagggctggcatgtgcgtgccggcgaaccccatgccgaagtccac
gccttgcgcgaggccggcgagctggcgcggggtgcctgtgcctacgtgaccctggagccg
tgcagccaccacggacgcacgccgccttgcgccgaagcgctggtcaaggccggggtgagc
cgggtggtcgccgcaatgcaggaccccaatccgcaggtcgctggcaatggcctcaagcgt
ctggccgacgccgggatcgaagtcgccagcggtgtgctcgaagccgaagcccgggcgctc
aaccccggtttcctcaagcgcatggagcatcgcctgccgttcgtccgggtcaagctggcg
atgagcctggatggtcgcaccgccatggccagcggcgaaagccagtggatcaccggcccg
gcggcgcgctctgccgtgcaacgcctgcgcgcccgctccagcgtggtcctgaccagtgcc
gccagtgtgatcgccgataacgcacggatgaccgtacgcggcgatgaactgggcctggat
cccgagaccaccgccctggcattggcgcgtccgccactgcgcgtgctgatcgatggccgg
ctgcgcgtgccgctggacgcgccgttcttccaggccggcgcggcgctggtggtcaccgcc
gccgaagacgatccgcgctatgccgccgccggccaccaactgctgcgcatacctggcgag
aacggccaggtcgacctgcgccagttgctggtggaactggcccgccgcgacatcaacgag
gtgctggtggaagccggccccggtctcgccggcgcgttcgcccggcttggcctgatcgac
gaataccagctgttcatcgctggcaggttccttggctccaccgcgcgtccgctgctcgac
tggccgctggcgcggatgagcgaggcaccggccctgaaaatcatcgaaatgcgcgcggtt
ggcgatgactggcgagtcactgccgtccccgcgcctgccccaggcgtataa

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