Pseudomonas sp. NyZ201: ACPFMA_03600
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Entry
ACPFMA_03600 CDS
T11215
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03030
DNA replication
psny03430
Mismatch repair
psny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPFMA_03600 (holA)
03430 Mismatch repair
ACPFMA_03600 (holA)
03440 Homologous recombination
ACPFMA_03600 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psny03032
]
ACPFMA_03600 (holA)
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_03600 (holA)
Enzymes [BR:
psny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPFMA_03600 (holA)
DNA replication proteins [BR:
psny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACPFMA_03600 (holA)
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACPFMA_03600 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
HP_1247_M
DNA_pol3_gamma3
Fpg-like_C
Motif
Other DBs
NCBI-ProteinID:
XRQ39581
LinkDB
All DBs
Position
complement(788782..789819)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLAPAQLGKHLQGALAPVYVVSGDDPLLCQEAADAIRLAARQQGFDERQVFSADANFDW
GTLLQAGASLSLFAQKRVLELRLPSGKPGDKGAAALIEYCSRPADDTLLLISLPKLDGSA
QKTKWGKALVEGAQVQFIQIWPVDTQQLPQWINQRLAQAGLAAQRDAVELIAARVEGNLL
AAAQEIEKLKLLADGNTITVETVQGAVADSARFDVFGLVDAVLNGEAAHALRMLEGLRGE
GVEPPVILWALARELRVLVGLAQQYSQGVPLEKAFSQARPPVWDKRRPLMSKALQRHSAQ
RWGQLLHDAQRIDAQIKGQAQGSPWTSLTRLSLLMAGQRLALPAE
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcgcccccgcccaactcggcaaacacctgcaaggcgccctcgccccggtctac
gtggtcagcggagatgatccgctgctgtgccaggaagccgccgacgccatccgcctggcc
gcacgccagcaaggtttcgatgagcgccaggtgttcagtgccgatgccaatttcgactgg
ggcaccctgctccaggccggcgccagcctttcgctgttcgcccagaagcgcgtgctggaa
ttgcgcctgccgtccggcaaaccgggtgacaagggagccgcagcgctgatcgagtattgc
tcgcggcccgccgacgacaccctgttgctgatcagcctgcccaagctcgacggcagcgcg
cagaaaaccaaatggggcaaggccctggtcgagggtgcgcaggtccagttcatccagatc
tggccggtggacacccagcagttgccgcaatggatcaaccagcgcctggcccaggccggg
ctcgccgcacaacgggatgcggtggaactgatcgcagcgcgggtcgaaggcaacctgctg
gcggcggcccaggaaatcgaaaagctcaagctgctcgccgacggcaacaccatcacggtg
gaaaccgtacaaggcgcggtcgccgacagcgcgcgtttcgatgtcttcggcctggtggat
gcagtgctcaacggcgaagcggcgcatgccctgcgcatgctcgaaggcttgcgtggcgaa
ggggtcgaaccaccggtgattctttgggcgctggcccgcgagctgcgggtgctggtcggc
ctggcccagcagtacagccagggcgtaccgctggaaaaagccttcagccaggccaggccg
ccggtgtgggacaaacgtcgcccgttgatgagcaaggccctgcagcgccattcggcacaa
cgctggggccagctgctgcatgacgcccagcgtatcgatgcgcagatcaaaggccaggcc
cagggttcgccctggaccagcctgacccgcctctcgctgctgatggccggccagcgcctg
gcgctgcctgccgagtaa
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