Pseudomonas sp. NyZ201: ACPFMA_06200 Help Entry ACPFMA_06200      CDS       T11215                                  Name (GenBank) DEAD/DEAH box helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism psny  Pseudomonas sp. NyZ201 Brite KEGG Orthology (KO) [BR:psny00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psny03400]     ACPFMA_06200 Enzymes [BR:psny01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      ACPFMA_06200     5.6.2.6  RNA 3'-5' helicase      ACPFMA_06200 DNA repair and recombination proteins [BR:psny03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     ACPFMA_06200 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc DEAD WHD_4th_Lhr WHD_Lhr WHD_3rd_Lhr Helicase_C ResIII MarR_2 Cas3-like_C_2 WHD_2nd_Lhr MarR TrmB HTH_IclR HTH_24 Motif Other DBs NCBI-ProteinID:  XRQ40051 LinkDB All DBs Position complement(1340063..1344334) Genome browser AA seq 1423 aa AA seqDB search MNLPALDHPVLDAFHPAVRSWFHRSFATVTAAQARAWPLIQAGRSLLVAAPTGSGKTLTA FLAVLDELFEQGLDNHGQLPDETLVVYVSPLKALSNDIQINLQNPLAGISAELERDGLPL PHIRTAVRTGDTPQKERTAMRRQAPHILVTTPESLYVLLGSESGRKGLQTVHTVIVDEIH AIAGNKRGSHLSLTLERLEALCQRPLRRIGLSATQRPLERVAQFLVGTGRPCAIVDIGHA RKRDLAIEVPPQPLGAVMANDVWDSVYDRLAVLAREHRTTLVFVNTRRLAERLARHLSDR LGREAVAAHHGSLAKEARLEAEQRLKRGELQVLVATASLELGIDIGEVELVCQMSSPGSI AAFLQRVGRSGHHVEGTPKGRLFATSRDDLIECVALLDCVRRGELDEVVIPRAPLDVLAQ QIIAEVSCQPWPEQALLDCFRRAQPYAALDEKHYVALLRMLAEGYSGRQGVRGAYLHRDA VSGELRGRRGSQLTALTSGGTIPDNADYAVLLEPQALNIGSVNEDFAVESIAGDIFQLGN ASYRILRVEPGKVRVEDARGLPPNIPFWLGEAPGRSDDLSRAVARLQAEIDQRLQDSGGH EQPLLDWLAATLGLGPDSAGQLLDYLGRTRQVLGALPSQDTLVMERFFDESGGTQLIIHS PFGSRINRAWGLALRKRFCRTFNFELQAAASEDAIILSLSAGHSFPLEEVWHYLPSATAE HILIQALLDAPLFGVRWRWNAGVALALPRFAGGKRIAPQIQRMRSEDLTAAVFPDQLACL ENIAGEREVPDHPLVEQTLDDCLHDAMDAEGWLALLRRIESGAIRLVCRDLPAPSPLAAA ILNARPYAFLDDAPLEERRTQAVLNRRWSEPQSGDELGALDRDAIAAVATEAWPTPNGND EMHEALMTLGAISAEEVAANPGWAEWLDALARAGRACRVAGLWLARERLNLLLAVYPGSG VEPAVPLLPGFDEVIDPDSAALELIRARLGAFGPLTAPQIAAPLYLPLSTVNQALARLEG EGYVLRGRFHPDQPDEQWCERHLLARIHRYTIKRLRREIEPVSLQDFMRFLFDWQHLSTS ARLQGNAALGEVLEQFEGYAAAAGSWESDLLPARLSDYNPRWLDEACRAGKFAWARLGPS AKVAASTLRSTPLVLLPRSRLGLWQGLGPAFDLDALSPRAQKVHAALSQHGALFFDELRD EARLLPTELENALQELVAAGLVSADSFAGLRALITPASKRQAHGSRRGRGPLFGGMDDAG RWALLRRGSAEREDTHEHIARVLLRRYGVVFWRLLEREADWLPSWRELLRTFHRLEARGE IRGGRFVSGLAGEQFALPEAIAVLRGVRRRPLDGSLVVVSGSDPLNLSGSLLPGSKVPAL AGNRLLYRDGVPLAALVAGAVQLWPEVDGQDENLLRERLIRGM NT seq 4272 nt NT seq  +upstreamnt  +downstreamnt atgaatcttcccgccctcgatcatccggtactggacgcctttcacccggccgtgcgcagc tggttccaccgcagcttcgccacggtcaccgccgcccaggcccgcgcctggccgctgatc caggctggccggtcgctactggtggcggcgcccaccggttccggcaagaccctcaccgcc ttccttgccgtgctcgacgagctgttcgaacagggcctggacaaccacggccagttgccg gacgaaaccctggtggtctacgtttcgccgctcaaggcgctgtccaacgatatccagatc aacctgcagaacccgctggcagggatcagcgccgaactggaacgcgacggcctgccgctg ccgcacatccgtaccgccgtgcgcaccggcgacacgccgcagaaagaacgcacggcgatg cgccggcaggccccgcatatcctggtgaccacccccgagtccttgtatgtgctgctgggt tccgaatccgggcgcaaaggcttgcagaccgtgcacacggtcatcgtcgatgaaatccac gccatcgccggcaacaagcgcggcagccacctgagcctgaccttggaacgcctggaagcc ctgtgccaacggccgttgcggcgcatcggcctgtcggccacgcaacgtccgctggagcgt gtcgcgcagttcctggtcggcaccgggcgcccctgcgccatcgtcgatatcggccatgcc cgcaagcgcgacctggccatcgaagtgccgccgcaaccgctgggcgcagtgatggccaac gatgtctgggacagtgtctacgaccgcctcgccgtactcgcccgcgagcatcgcaccacg ctggttttcgtcaatacccggcgcctggccgagcgcctggcccgccatctgagcgaccgc ctcggtcgcgaagccgtggccgcgcaccatggcagcctggccaaggaagcccgcctggag gccgagcaacgcctcaagcgcggcgagttgcaggtgctggtggcgaccgcctcgctggag ctgggcatcgatatcggcgaggtcgaactggtctgccagatgtcctcgccgggctccatc gccgccttcctgcaaagggtcgggcgctccgggcaccacgtggaaggcacgcccaagggc cgtctgtttgccaccagccgcgacgacctgatcgagtgcgtggccctgctcgactgcgtg cgccgtggcgagctggacgaggtggtgatcccccgcgcgccactggacgtgctggcccag cagatcattgccgaggtcagttgccagccctggccggaacaggcgctgctcgactgtttc cgtcgcgcccagccctacgccgcgttggatgaaaaacactacgtggccttgctgcgcatg ctcgccgagggctacagcggtcgccagggcgtgcgcggcgcctatctccatcgcgatgcg gtcagcggcgaattgcgtggccgccgcggcagccagctgaccgccctgaccagcggcggc accatccccgacaacgccgactatgccgtgctcctggaaccccaggcgctgaacatcggc agcgtcaacgaggacttcgccgtggaaagcatcgccggcgatatcttccagctcggcaac gcctcgtaccgcatcctgcgggtcgagccgggcaaggtgcgggtcgaggacgcccggggc ctgccaccgaacatcccgttctggcttggcgaagcgccggggcgcagcgacgacctgtcg cgtgccgtggcccgcctccaggcggaaatcgaccagcgcctgcaggacagcggcggccat gaacaaccgctgctcgactggctcgccgccacgctcggcctcggccccgacagcgccggg caattgctggattacctgggccgcacccgccaggtgctcggcgccctgccgtcccaggac accctggtgatggaacgcttcttcgacgaatccggcggaacccagctgatcatccactcg ccgttcggcagccgcatcaaccgcgcctggggcctggccctgcgcaagcgcttctgccgc accttcaacttcgaattgcaggccgcggccagcgaggacgcgatcatcctgtcgctttcg gccggccatagctttcccctcgaagaggtctggcattacctgcccagtgccacggccgag cacatcctgatccaggcgctgctcgatgcgccgctgttcggcgtgcgctggcgctggaac gccggggttgccctggccctgccgcgctttgccggcggcaagcgcatcgccccgcagatc cagcgcatgcgcagcgaagacctgaccgcggcggtgttcccggaccaactcgcctgtctg gaaaatatcgccggcgaacgcgaggtgcccgatcacccgctggtggaacagaccctcgac gactgcctgcacgacgccatggacgccgaaggctggctggccctgctgcggcgtatcgaa agcggcgctatccgcctggtgtgccgcgacctgccggcgccctcgccgctggccgcggcg attctcaatgcccggccctatgccttcctcgacgatgcaccgctggaagaacggcgcacc caggccgtgctcaaccggcgctggagcgagccgcaaagcggcgatgaactgggcgcgctg gaccgcgatgcgattgccgccgtggcgacggaggcctggccgacgccgaacggcaacgac gagatgcatgaagcgttgatgaccctgggggcaatcagcgccgaagaggtggcggccaac ccgggctgggcagagtggctggacgcgctcgccagggcggggcgtgcctgccgggttgcc ggactgtggctggcgcgggagcgactgaacctgttgctggctgtctatcccgggtctggc gtcgaacccgcggtgcccctgctgccgggcttcgatgaggtcatcgacccggacagcgcc gccctcgaactgatccgcgcccgcctcggcgccttcggcccgctgacagcgccgcagatc gccgcgccgctgtacctgccgctgtccacggtgaaccaggccctggcccggctggaaggc gaaggctatgtgctgcgcggccggttccatcccgaccaacccgatgaacaatggtgcgaa cgccatctgctggcgcgcatccatcgctacaccatcaagcgcctgcgccgcgagatcgag ccggtcagcctgcaggacttcatgcgttttctcttcgactggcagcacctgtccacgagc gcacgcctgcaaggcaacgcggcgctgggcgaagtgctggaacagttcgaaggctacgcg gcggcagccgggtcctgggaaagcgacctgctgccggcacggttgagcgactacaacccg cgctggctggacgaagcctgccgcgccggcaagttcgcctgggcccggctcgggccttcg gccaaggtggcagccagcaccttgcgcagcacgccgctggtattgctgccgcgcagtcgc ctggggctttggcaggggctcgggccagcgttcgacctcgacgccctgtcgcctcgcgcg cagaaggtgcatgccgcgctgagccagcatggcgcgctgttcttcgacgaactgcgcgac gaggcccgcctgctccccaccgaactggaaaacgccttgcaggagctagtggccgccggg ctggtcagtgccgacagctttgccggattgcgcgcgctgatcacgccggccagcaagcgc caggcccacggcagccggcgcggacgcgggccgctgttcggcggcatggatgatgccgga cgctgggccctgttgcgtcggggcagcgccgagcgcgaggacacccatgaacatatcgcc cgcgtcctgctgcgccgctacggcgtggtgttctggcgcctgctggagcgcgaggccgac tggctgccgagctggcgcgaactgctgcgcacgttccaccgcctcgaagcccgtggcgag atccgcggcgggcgcttcgtcagcgggctggccggggagcagttcgccttgccggaggcc attgccgtgctgcgcggggttcggcggcggccgctggatggcagcctggtggtggtcagc ggcagcgacccgctgaacctcagcggcagcctgctgcccggcagcaaggtcccggcgctg gcgggcaaccgcttgctgtatcgggatggcgtgccgctggcggcgctggtggcgggggcg gtgcaactgtggccggaggtggatgggcaagatgaaaacctgctgcgggagcgtctgatc cggggcatgtga

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