Pseudomonas sp. NyZ201: ACPFMA_08860
Help
Entry
ACPFMA_08860 CDS
T11215
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00071
Fatty acid degradation
psny00280
Valine, leucine and isoleucine degradation
psny00310
Lysine degradation
psny00362
Benzoate degradation
psny00380
Tryptophan metabolism
psny00410
beta-Alanine metabolism
psny00640
Propanoate metabolism
psny00650
Butanoate metabolism
psny00907
Pinene, camphor and geraniol degradation
psny00930
Caprolactam degradation
psny01100
Metabolic pathways
psny01110
Biosynthesis of secondary metabolites
psny01120
Microbial metabolism in diverse environments
psny01200
Carbon metabolism
psny01212
Fatty acid metabolism
Module
psny_M00087
beta-Oxidation
psny_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ACPFMA_08860 (fadB)
00650 Butanoate metabolism
ACPFMA_08860 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ACPFMA_08860 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ACPFMA_08860 (fadB)
00310 Lysine degradation
ACPFMA_08860 (fadB)
00380 Tryptophan metabolism
ACPFMA_08860 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ACPFMA_08860 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ACPFMA_08860 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ACPFMA_08860 (fadB)
00930 Caprolactam degradation
ACPFMA_08860 (fadB)
Enzymes [BR:
psny01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ACPFMA_08860 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ACPFMA_08860 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ACPFMA_08860 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ACPFMA_08860 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
XRQ40536
LinkDB
All DBs
Position
1969852..1971999
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELRQAVDTIKADASIKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELIAGNLEANRIFSDFEDLEVPTVVAINGIALGGGLE
MCLAADFRVMSTTAKIGLPEVKLGIYPGFGGTVRLPRLIGADNAVEWIASGKENRAEDAL
KVGAVDAVVAPEKLGEAALDLIKRAISGEFDHKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKAIEVEAAGFAKLARTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEAQVK
DDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVADASVLEVLKPVVYEQREVSDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKNGQRFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtcttaccctgaacgaactg
cgtcaggcggtggataccatcaaggccgacgcttcgatcaagggcgtgattgtcagcagt
ggcaaggacgtgttcatcgtcggtgccgacatcaccgaattcgtcgacaacttcaagctg
cccgaggccgagctgatcgccggcaacctggaagccaaccgcatcttcagcgacttcgaa
gacctcgaggtgccgaccgtcgtcgccatcaacggcatcgccctgggtggcggtctggag
atgtgcctggcggccgacttccgcgtgatgtccaccactgccaagatcggcctgcctgaa
gtcaagctgggtatctacccgggcttcggcggtaccgtgcgcctgccgcgcctgatcggc
gccgacaacgcggtcgagtggatcgcctccggcaaggaaaaccgcgccgaagacgccctg
aaagtgggcgcggtcgatgccgtggtcgctcctgagaaactcggcgaagcggccctggac
ctgatcaaacgtgccatcagcggcgagttcgatcacaaggccaagcgccagccgaagctg
gaaaagctcaagctcaacgccatcgaacagatgatggccttcgaaaccgccaagggcttc
gtcgctggccaggccggcccgaactacccggcgccggtcgaagcgatcaagaccatccag
aaggccgccaacttcggtcgcgacaaggccatcgaagtggaagccgccggctttgccaag
ttggccaggacctcggtagccgaaagcctgatcggtctgttcctcaatgaccaggaactc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggcagccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagtccgcggtcaagggcacgccgatc
ctgatgaaggacatccgcgaggaagccatccagctcggcctgaacgaagcgtccaagctg
ctcggcaagcgtgtcgagaaaggccgcctgacgcctgccaaaatggccgaggccctgaac
gcgattcgtccgaccctgtcctacggcgacttcgccaatgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcaagcggtgctggccgaggttgaagcccaggtcaag
gacgatgcgatccttgcctcgaacacctcgaccatctccatcaacctgctggccaaggca
ctcaagcgcccggaaaacttcgttggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtgatccgtggcgagaagtccagcgaagtggcggtggctaccaccgttgcc
tacgccaagaagatgggcaagaacccgatcgtggtcaacgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggcgtcgac
ttcgtacgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggtcaccatggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaggacgatcgtcgctctgccgtcgacgctctgtacgaggccaaccgc
ctcggccagaagaacggcaagggcttctacgcctacgaaaccgacaagcgcggcaagccg
aagaaggtcgccgatgcttcggtgctggaagtgctcaagccggtggtctacgagcagcgc
gaggtcagcgacgaggacatcatcaactggatgatggtcccgctttgcctggaaaccgtg
cgctgccttgaagacggcatcgtcgagaccgcagccgaggccgacatgggcctggtctac
ggcatcggtttccctcccttccgcggcggcgcgctgcgctacatcgactccatcggtgta
gccgagttcgtggccctggcagacaagtacgccgatctgggcccgctgtaccaccccacc
gcgaagctgcgtgaaatggccaagaacggccagcgcttcttcggttaa
DBGET
integrated database retrieval system
