Pseudomonas sp. NyZ201: ACPFMA_10410
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Entry
ACPFMA_10410 CDS
T11215
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00550
Peptidoglycan biosynthesis
psny01100
Metabolic pathways
psny01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ACPFMA_10410 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ACPFMA_10410 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psny01011
]
ACPFMA_10410 (mrdA)
Enzymes [BR:
psny01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ACPFMA_10410 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psny01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
ACPFMA_10410 (mrdA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
AAA_12
Motif
Other DBs
NCBI-ProteinID:
XRQ40824
LinkDB
All DBs
Position
complement(2325222..2327120)
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AA seq
632 aa
AA seq
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MPQPIPLKDHEKEQHLVNRRLVACAILVLALVAVLVGRLYVLQVLQHDQQTAVSENNRVH
ILPIPPERGLIYDRNGVVLADNKPSFDLTMTRERAGDSAKTLDTLAQVLNLGEDDRRQFD
KDLRRGRKPFEPVTLMVGLTEEQIALIAVNQFRLPGLEVEPQFIREYPLAEHFAHSVGYV
GRINEKEAKVLDSTQYRGTQSIGKTGIERFYENELHGQVGYEEVETNAQGRVMRVLNHKD
PVPGKNITLSLDAHLQLAAEHALGDRRGAVVVLDPGNGDVLAMVSNPSFDPNLFVKGISF
KQYAALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVTTPGSRVFDPGYYELPNY
DHKYRNWNRSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMARFGLGEKVSLDMFE
EAPGLMPSQQWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGKWHRPHL
ALEVGDTAPVDPNPMPDIVLHDSHAWDQVNQGMQMVMHDPRGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNRNKTLERHRDNALFVGFAPADHPSVVVAVMIENGEAGGRVAGPVVR
EIMDAWLLDDQGHLKPQYAGGQGLALHASAHP
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaccgatccccctcaaggaccacgaaaaggaacagcatctggtcaaccgccgg
ctggtagcctgcgccatcctggtcctggccctggtcgccgtactcgtgggccgcctctat
gtcctgcaggtgcttcagcacgaccagcagaccgccgtgtcggagaacaaccgcgtccat
atcctgcccatcccgcccgagcgcgggctgatctatgaccgcaacggcgtggtcctggcc
gacaacaagcccagcttcgacctgaccatgacccgcgagcgcgccggcgattcggcgaag
accctggacaccctggcgcaggtcctgaacctcggcgaagacgaccgccgccagttcgac
aaggacctgcgccgcggccgcaagcctttcgagccggtcaccctgatggtcggcctgact
gaagagcagatcgcccttatcgcggtaaaccagtttcgcctgccggggcttgaggtggag
ccgcagttcatccgcgaatatcccttggccgagcatttcgcgcattccgtgggctatgtc
ggacggatcaacgagaaggaagccaaggtcctcgacagcacccagtaccgcggtacgcaa
tctatcggcaagaccgggatcgagcgcttctacgagaacgagctgcatggccaggttggc
tatgaagaagtcgagaccaacgctcagggccgggtgatgcgggtactcaaccataaggac
ccggtccccggaaagaacatcaccctcagcctcgacgcgcatttgcagctggccgccgag
cacgccctgggcgaccgccggggcgcggtggtggtactcgaccccggcaacggcgacgtg
ctggcgatggtcagcaacccgagcttcgaccccaacctgttcgtcaagggcatcagcttc
aagcagtacgctgccctgcgcgactccatcgaccggccactgttcaaccgcgtgctgcgc
gggctgtatgcacccggatcgacggtcaagccggaggtcgccatcgccggcctcgacagc
ggcgtgaccaccccgggcagccgcgtgttcgacccgggctattacgagctgcccaactac
gaccacaagtaccgcaactggaaccgcagcggcgatggctgggtggacatgtacacggcg
atcatgcgttccaacgacacctacttctacgacctggcgcacaagctcggcatcgatcgc
ctgcacgactacatggcccgcttcggcctcggcgagaaggtctcgctggacatgttcgag
gaagcaccgggcctgatgccctcgcagcaatggaaacgcgccactcgccgccaggcctgg
ttcccgggggaaacgctgatccttggcatcggccagggctatatgcaggtcacgccgcta
cagctggcccaggccaccagcctgctggccagcaagggcaagtggcaccggccgcacctg
gcgctcgaagtcggcgacacggcgccggtcgaccccaaccccatgccggacatcgtgctg
cacgacagccatgcctgggaccaggtcaaccagggcatgcaaatggtcatgcacgacccc
cgcggcatcgcccgcgccgccgccgccggagcgcaataccgcatcgccggcaagagcggc
acggcccaggtggtggcgatcaagcagggcgaacgctacaaccgcaacaagactctggag
cggcaccgcgacaacgccctgttcgtcggtttcgcgcctgccgatcatcccagcgtggta
gtggcggtgatgatcgagaacggcgaggccggcggccgggtggccgggccggtggtgcgg
gaaatcatggatgcgtggctactggacgatcaggggcaccttaaaccccaatacgccggc
ggccagggcctggcgctgcatgcatcggcacacccctag
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