Pseudomonas sp. NyZ201: ACPFMA_12040
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Entry
ACPFMA_12040 CDS
T11215
Name
(GenBank) phytoene desaturase family protein
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00906
Carotenoid biosynthesis
psny01100
Metabolic pathways
psny01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
ACPFMA_12040
Enzymes [BR:
psny01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
ACPFMA_12040
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Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_oxidored
FAD_binding_2
Pyr_redox_2
Pyr_redox
HI0933_like
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
XRQ41127
LinkDB
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Position
2715706..2717226
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AA seq
506 aa
AA seq
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MKHYDAVVIGAGNAGLTAATALQRGGSRTLLVERHNIPGGCATSFVRGNFEFEVALHQLS
GLGTEDKPFVMRRFFEQLGVMDKVEFIQEHALYRLVVPGELDVTLPASWSGIRRLLQSMY
PAESEAIERFMLVCEKVTLESFMTLPQASRANSEAMLRSMCPYYLRYGFRPAREVLDEFF
ADARLKNILATYWLYLGVAPSMLPFADLATMLYAYAVFKPWHIKGGSQAMSSALVESFLE
AGGEVRFNCGVEQIHTADGRIRGVSLEGGERIDCDAVVSNASPLITFNELLDLERPPAKI
RQDFKSRRMGTSAFVIYLGLDCTPEELGVTTASSFIYETLDEEQIHARMGSLEPPLGGML
TCYNLEDPSAAPAGKSQVVLVCLQYGEVWKSVSPERYAQTKYEFAEKLIAVIEKVYPKVR
EYIEEVEVATPLTMMRYLNTPGGAIYGFQQSAQDSALLRERLDAVPGLYMAGAWTTMGGF
QPTYMAGESTARAVLKQLKARKSEHV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgaagcactacgacgccgtggtgattggcgccggcaacgccgggctgaccgccgcgact
gcgctgcagcgcggcggcagccgcacgctgctggtggagcggcacaatattccgggtggc
tgcgccacgtccttcgtgcgtgggaacttcgagttcgaggtggcgctgcatcagttgagc
ggcctgggtaccgaggacaagccgttcgtgatgcgcaggtttttcgagcaattgggggtg
atggacaaggtcgagttcatccaggagcacgcgttgtatcgcctggtggtgccgggggag
ctggacgtcaccctgccggccagctggtcgggcatccggcgcctgctgcagtcgatgtac
ccggccgaaagtgaggccatcgagcgcttcatgctggtgtgcgaaaaggtcaccctggaa
agcttcatgaccctgccgcaggcttcgcgcgccaacagcgaggcgatgctcaggtcgatg
tgcccctactacttgcgctatggcttccgtccggcccgcgaggtgctggacgagttcttc
gccgacgccaggctgaagaatatcctcgccacctactggctctacctcggcgtggcgccg
agcatgctgccgttcgccgacctggccaccatgctttacgcctacgcggtgttcaaaccc
tggcatatcaagggcggctcccaggccatgtccagcgcgctggtggagtccttcctcgaa
gcgggcggcgaggttcgcttcaactgcggcgtggagcagatccataccgcggacgggcgc
atccgtggcgtaagcctggaaggcggcgaacggatcgactgtgatgcggtggtctccaac
gccagcccgttgatcaccttcaatgaactgctcgacctggagcgcccgccggcgaagatc
cgccaggacttcaagtcgcgacgcatgggcacctcggcgttcgtcatctacctgggcctg
gactgcacgcccgaggaactgggggtgaccaccgcctccagctttatctacgagaccctc
gacgaggagcagatccacgcgcgcatgggcagcctggagccgccgctgggcggcatgctc
acctgctacaacctggaagacccgagcgccgcgcctgcgggcaaaagccaggtggtactg
gtttgcctgcagtacggcgaggtatggaagtcggtatccccggagcgctacgcgcaaacc
aagtatgagttcgccgaaaagctgatcgcggtgatcgagaaggtctaccccaaggtgcgc
gagtacatcgaggaggtagaagtggctacgccgctgaccatgatgcgctacctcaacacg
ccgggcggggccatctacggtttccagcagagtgcccaggattcggcgctgctgcgcgaa
cggctggatgcggtgccgggcctgtacatggccggcgcctggaccaccatgggcggcttc
cagccaacctacatggccggcgaatccaccgcccgcgccgtactcaagcaactgaaggcc
aggaagtccgaacatgtctga
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