Pseudomonas sp. NyZ201: ACPFMA_12950
Help
Entry
ACPFMA_12950 CDS
T11215
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00250
Alanine, aspartate and glutamate metabolism
psny00310
Lysine degradation
psny00350
Tyrosine metabolism
psny00650
Butanoate metabolism
psny00760
Nicotinate and nicotinamide metabolism
psny01100
Metabolic pathways
psny01120
Microbial metabolism in diverse environments
Module
psny_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
ACPFMA_12950 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ACPFMA_12950 (gabD)
00310 Lysine degradation
ACPFMA_12950 (gabD)
00350 Tyrosine metabolism
ACPFMA_12950 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
ACPFMA_12950 (gabD)
Enzymes [BR:
psny01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
ACPFMA_12950 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
ACPFMA_12950 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
ACPFMA_12950 (gabD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
XRQ41289
LinkDB
All DBs
Position
2900914..2902362
Genome browser
AA seq
482 aa
AA seq
DB search
MQLNDPSLFREQAYIDGTWMAADSGQTIDVFNPATGRLLGTVPKMAAAETRRAIAAAELA
LPGWKALTAKDRAGRLRRWFELMIEHQEDLARLMTLEQGKPLSESRGEIVYAASFLEWFA
EEAKRVYGDMIPGHQPDKRLMVIKQPIGVTAAITPWNFPSALITRKAGPALAAGCTMVLK
PASQTPYSALALAVLAERAGIPKGVLSVVTGSAGAVGGELTGNPAVRKLTFTGSTEIGRQ
LMAECAQDIKKVSLELGGNAPFIVFEDADLDLAVQGALVSKFRNNGQTCVCANRLYVHDS
VYEAFVARLVAAVARLNVGNGLEEGVTTGPLIDIKAVAKVEEHIADAVAKGARVVAGGAH
HALGGTFFQPTVLADVPPTAAVAKEETFGPLAPVFRFSSEDEVVAMANDTEFGLASYFYA
KDMSRIFGVGEALEYGIVGINTGIISTEVAPFGGIKASGIGREGSRYGIDDYLEIKYLCM
SV
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
gtgcaattgaatgaccccagcctgttccgcgagcaggcctacatcgacggaacctggatg
gctgccgacagcggccagaccatcgacgttttcaacccggcaaccggtcgcctgctgggc
accgtgccgaagatggcggcggctgaaacccggcgtgccatcgccgccgcggagctggcg
ctgccgggctggaaggccctgaccgccaaggaccgcgccggccgcctgcggcgctggttc
gagttgatgatcgagcaccaggaagacctcgcccgcctgatgaccctcgaacaaggcaag
cccctgagcgaatcccggggagaaatcgtctacgcggcgtccttcctggaatggttcgcg
gaggaggccaagcgggtctacggcgacatgatccccgggcaccagcccgacaagcggctg
atggtgatcaagcaaccgatcggcgtcacggcggcgatcacgccgtggaacttcccttcg
gcgttgatcacccgcaaggccggcccggccctggctgccggctgcaccatggtgctcaag
ccggcctcgcagaccccgtactcggcccttgccctggcggtgctggccgagcgcgcgggc
attcccaagggggtgctgagcgtcgtgacgggttcggcgggcgccgtgggcggggaactt
accggcaacccggcggtgcgcaagctgaccttcaccggctcgaccgaaatcggccggcaa
ctgatggccgaatgcgcccaggacatcaagaaggtttcgctggagctgggcggcaacgca
cccttcatcgtgttcgaggacgccgacctggacctggcggtgcaaggcgctctggtctcc
aagttccgcaacaatggccagacctgcgtctgtgccaaccgcctgtatgtgcatgacagc
gtctacgaggcgttcgtcgccaggctggtcgccgccgtggcccgcctgaacgtgggtaac
ggcctggaggagggcgttaccaccggtccgctgatcgacatcaaggcggtggcgaaagtc
gaggagcacattgccgatgcggtggccaagggcgcccgcgtcgtcgccggaggcgctcat
catgccttgggcggtaccttcttccagccaaccgttctggccgacgttccgccaacggcc
gcggtggccaaggaagagaccttcggcccgctcgcgccggtcttccgtttcagcagcgag
gacgaggtggtggcgatggccaacgacacggaattcggcctcgcgtcgtatttctatgcg
aaggacatgagccgcatcttcggcgtgggcgaggcgctggagtacggcatcgtcggtatc
aacaccgggatcatctccaccgaagtcgcgcccttcggcggcatcaaggcctcgggcatc
ggtcgcgagggctcgcggtatggcatcgacgactatctcgagatcaagtacctgtgcatg
agcgtctga
DBGET
integrated database retrieval system
