Pseudomonas sp. NyZ201: ACPFMA_13875
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Entry
ACPFMA_13875 CDS
T11215
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
psny Pseudomonas sp. NyZ201
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psny03000
]
ACPFMA_13875
Transcription factors [BR:
psny03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ACPFMA_13875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_23
HTH_38
HTH_31
HTH_Tnp_ISL3
DUF6875
Motif
Other DBs
NCBI-ProteinID:
XRQ41471
LinkDB
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Position
3119514..3120533
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AA seq
339 aa
AA seq
DB search
MSRSTSRTTGRPTLAEVARLCGVSPITVSRALRGVATVAPELVEKVRAAAAQLGYVANPA
ARALASAQSQSVAVLIPSLSNQLFVETLDAIHDVLRPRGLEVMIGNFHYDAAVEENLLRN
YLAHQPRGLLLTGFERSEAARRMLAASRVPCVHMMELGGEEGVVSVGFSQHEAGRAVARH
LLERGRRRLGFIAAQLDARVLQRAEGFRQALGEAGLYDPALELLVPQPSSIGLGGELFGQ
LLARHGDIDGIFFCNDDLAHGAIFQAQRQGIRVPEQVAMVGFNDLPASAHMVPRLTSIRT
PLAAVGRHAAQALLDLLDGRIGQNPIRDLGFALMIRESS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagcacctcccgcaccacaggtcgtcccaccttggccgaagtcgcccggctt
tgcggggtgtcgccgatcaccgtgtcccgggccctgcgcggggtggccacggtagcgccg
gagctggtggagaaggtccgcgccgccgcggcccagctcggctatgtcgccaaccctgcc
gcccgcgccctggcctcggcgcagagccagtcggtggcggtgttgatcccgtcgttgtcc
aaccagctgttcgtcgagaccctcgacgcgatccacgatgtcctgcgcccacgcgggctg
gaagtgatgatcggcaacttccactacgacgccgccgtggaggaaaacctgctgcgcaac
taccttgcccaccaacctcgcggcctgctgctgaccggcttcgagcgcagcgaggcggcg
cggcgcatgctcgccgccagccgcgtaccctgcgtgcacatgatggaactgggaggcgag
gagggtgtggtctcggtgggcttttcccagcatgaagccgggcgcgccgtcgcgcgtcac
ctgctcgaacgcgggcgccgccgtctcggttttatcgctgcgcaactggatgcccgcgtc
ctgcaacgcgccgaaggcttccgccaggccctgggcgaagccgggctgtacgacccggca
ctggaactgctggtcccgcagccatcgtcgatcggcctgggtggcgagctgttcggccag
ttgctggcccgccatggcgatatcgacgggatcttcttctgcaacgacgacctcgcccac
ggtgcgatcttccaggcccagcgccagggcattcgcgtcccggaacaggtggcgatggtc
gggttcaacgacctgccggcctcggcccatatggtcccgcgcctgacgtcgatccgcacg
ccgctggccgctgtcggccggcacgcggcccaggccttgctcgatctgctcgacggcaga
atcgggcaaaatccgatccgggacctgggttttgccttgatgatccgcgaaagcagctga
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