KEGG   Pseudomonas sp. NyZ201: ACPFMA_15635
Entry
ACPFMA_15635      CDS       T11215                                 
Name
(GenBank) type VI secretion system protein
  KO
K11891  type VI secretion system protein ImpL
Organism
psny  Pseudomonas sp. NyZ201
Pathway
psny02025  Biofilm formation - Pseudomonas aeruginosa
psny03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:psny00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ACPFMA_15635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    ACPFMA_15635
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:psny02044]
    ACPFMA_15635
Secretion system [BR:psny02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   ACPFMA_15635
SSDB
Motif
Pfam: IcmF-related_N IcmF_C
Other DBs
NCBI-ProteinID: XRQ36466
LinkDB
Position
complement(3526816..3530625)
AA seq 1269 aa
MSLSVVAWVIGILVVLLLVVLLVLWLRSRNGATVRSFYLAVRQMEHEQGVSDRYQAPWLL
MLGDEVEGKRLCADWNLNPVDKPAWFGRWWADPSGAVLVVPQALFMPGEGMKQASGWWNL
IGLLLRLRSRRPLDGVIWTIAAADLLDADRAATLGLDARRRFIDLLQRLGTSLPVYVLVT
GMDEVPGFQELARALPEQARKQALGWSSPYPAEAAWQSQWTDDAVDGISHALSEAIVQMG
TLSGQLSNELDTLPQRFEGMRRNLQMLLWPVFQGNTHGEAPALRGLYFTGTQAMSGEAGA
LTALDQPRVQNVFAHGLWQQRINAERGLARPIPRLLQLRQRWQRIVAVSAAVVGVLWAIG
MIWVWRDSLRDAGELSRLLQNAQNDYVAVPDDSHRQELTRHNVQSFWNVLERAPRWHFTS
LAYPTSWFSSLDQDMDRVLQRTAMTHMQQPIHDLLQAELRDVLAIAEASRRTAAPQGGDP
AQWPSYLKARELVHKVLRLEQVASLYGQAQANQKTPLDQLIPLSNQVLDMNLNAGTLPNE
RYYNRLLVNQGISPLKPLDLSLYRSTIQGNFNQLMGNWLGHYFRTDGYVVSAGYLKLYLD
RLENGAGQTLRELEHVDALIEDLQSAIDLTNSTWSRGKGQDLVAGYGELLEKIRQSKLLG
PAIADETERQAEQMQYAFKEQWIAQGSSSRNLLVQNAAGQLALQDRIVHLQSAINLLLKR
DFVARALREDALGEATPLSHVDGEGLRLAQSYADSYRQYAHESLAGIPPVYRNALLKTAE
TVAGDAMWASLGRQTVDSELPGAATFQVRTDQALAVHGAFIQLQRPDLASGLQSALNRSA
LADVSLAIEEVYQQPLFRDYSAINQWDGTKDLGLRLFRAVDSQDLKGSLEQQFAVITAIT
EQAAPAKDWLMTQLPSLNLGEAELVNRFNSLSEEMVKYKAQNPSSSPALITQLIVRDFND
MDQGSCAKILGSALAPHASGQLTQHWNALQRSALQRCQYLQRQSVAGAWNELAGYFNQYL
AGRFPFASDRHAPDADPARVQYFLTLIDNRLPQARDGLGLLTVRDRAAAGEFLDRIALAR
PWLGAILMRDKAGLSGIDMEVTWRTDRDSERGADQVIAWTLAAGNREIVWPGDEQVLHWS
LGQTLDLRLRWARDGTQRPVNDPVQQQLHVNGLEAEWQYQGPWALLRMMAAHGSTLRQPN
VDYTEFPLSLEVPVHAQPEEDNQTRMFLRLSLMSQGGKAPLSIHPLPVQAPSSPLGYASR
AVVDSGDLP
NT seq 3810 nt   +upstreamnt  +downstreamnt
atgagcctgtccgtcgtggcctgggtgattggcatcctggtcgtcctgctgctggtggtg
ctgctggtgctgtggctacgcagccgcaatggcgcgacggtgcgcagcttttatctggcc
gtgcgtcagatggaacacgaacagggggtcagcgaccgctaccaggctccctggctgctg
atgcttggcgacgaggtcgaaggcaagcgcctgtgcgccgactggaacctcaacccggtg
gacaaaccggcctggttcggtcgctggtgggcggaccccagcggcgctgtactggtggtg
ccgcaggcgctgttcatgcccggcgagggcatgaagcaggccagcggctggtggaacctg
atcggcctgctattgcgcctgcgctcgcgccgcccgctggacggcgtgatctggaccatc
gccgccgccgacctgctcgacgccgaccgcgccgcgaccctgggcctcgacgcacgccgg
cgcttcatcgacctgctgcaacgcctgggtaccagcctgccggtgtatgtcctggtcacc
gggatggacgaggtgccgggcttccaggaactggcccgggccttgccggagcaggcacgc
aagcaggcgctcggctggtcttcgccgtatccggcggaggcggcctggcaatcgcagtgg
accgacgacgcggtggatggtatcagccatgcgctgtccgaagcgatcgtgcaaatgggg
accctgtccgggcaactgagcaacgaactggacaccctgccgcagcgtttcgagggcatg
cgacgcaacctgcagatgctcctgtggccggtgttccagggcaacacccacggcgaggcg
ccggccctgcgcggcctgtacttcaccggcacccaggccatgtcgggcgaggccggggca
ttgactgcgctggaccagccgcgggtgcagaacgtcttcgcccacggcctttggcagcaa
cgcatcaacgccgagcgcggcctggcccggccgattccgcggctgttgcaactgcgccag
cgctggcagcgcatcgtcgcggtgagcgcggcggtggtcggtgtgctctgggccatcggc
atgatctgggtgtggcgcgattcgctgcgcgatgctggcgaattgtcgcgcctgttgcag
aacgcacagaacgactacgtcgcggtccctgacgacagtcatcgccaggaactgacccgg
cacaacgtgcagagtttctggaatgtgctggagcgtgcgccacgctggcacttcacctcg
ctggcctatccgacctcctggttctcgtcgctggaccaggacatggaccgggtgctgcag
cgcaccgccatgacccatatgcagcagccgatccacgacctgctgcaggccgagctgcgt
gatgtactggccatcgccgaggcctcccggcgtacggctgcgccccagggcggtgatccg
gcgcaatggccgagctacctcaaggcgcgcgaactggtgcacaaggtgctgcgcctggag
caggtggccagcctctatggccaggcccaggccaaccagaagaccccgctcgaccagttg
atcccgctgagcaaccaggtcctggacatgaacctgaacgccggcaccctgcccaacgag
cgctactacaaccgcctgctggtcaaccagggcatcagcccgctcaagccgctagacctg
tcgctgtaccgcagcaccatccagggcaacttcaaccagctgatgggcaactggctgggg
cactatttccgcaccgacggctatgtcgtttccgccggttacctcaagctctaccttgac
cgcctggaaaacggtgccgggcagaccctgcgcgagctggaacatgtggatgcgctgatc
gaagacctgcagtcggccatcgacctgaccaactccacctggagccgcggcaagggccag
gacctggtggcaggctacggggaactgctggaaaagatccgccagagcaagctgctgggc
ccggccatcgccgacgagaccgagcgccaggccgagcagatgcaatacgccttcaaggaa
cagtggatcgcccagggctcgtcgagccgcaacctgctggtgcagaacgctgccgggcaa
ctggccttgcaggaccgcatcgtccatctgcaaagcgcgatcaacctcttgctcaagcgt
gacttcgtcgcccgggccctgcgcgaggatgcgctgggcgaggcgacgccgctgagccat
gtggatggcgagggcctgcgcctggcgcagagctatgccgacagctatcggcagtatgcc
cacgagtcgctggcgggcattcctccggtgtaccgcaatgccctgctgaagacggccgaa
acggtggcgggcgacgccatgtgggccagcctgggccgtcagaccgtggacagcgaactg
cccggcgccgcgaccttccaggtgcgcaccgaccaggccctggccgtgcacggtgcgttt
atccagctgcagcgcccggacctggccagcggcctgcaaagcgccttgaaccgcagcgcc
ctggccgatgtgtccctggccatcgaggaggtctaccagcagccgctgttccgtgactac
agcgccatcaaccagtgggacggcaccaaggacctgggcctgcgcctgttccgtgcagtg
gattcccaggacctgaagggcagcctggagcaacagttcgccgtgatcaccgcgatcacc
gaacaggcggcgccggccaaggactggctgatgacccagttgccgagcctcaacctcggc
gaggcggagctggtcaaccgtttcaattcccttagcgaggagatggtcaagtacaaggcc
cagaacccgtccagctcgccagccctgatcacccaactgatcgtgcgcgacttcaacgac
atggaccagggcagttgcgccaagatcctcggctcggccctcgcgccccatgcttccggg
caactcacccagcactggaatgccctgcagcgcagcgccctgcagcgttgccagtacctc
cagcggcagagcgtggccggcgcctggaacgaactggccggctatttcaatcagtacctg
gccgggcgcttcccctttgccagcgaccgccatgcgccagacgcggaccctgcacgggtg
cagtatttcctcaccctgatcgacaaccgcctgccacaggcgcgggacggtctcggcctg
ctgacggtccgcgatcgcgcggcggccggcgaattcctcgaccggatcgcactggcccgc
ccctggctcggggcgatcctcatgcgcgacaaggccggcctgtccgggatcgacatggaa
gtgacctggcgtaccgaccgcgacagcgaacgcggcgccgaccaggtcatcgcctggacc
ctggctgccggcaatcgagaaatcgtctggccgggggatgagcaggtgttgcactggagc
ctcggccagaccctcgatctgcgcttgcgctgggcccgcgacggcacccagcggccggtc
aacgacccggtgcagcagcaactccacgtcaacggcctggaagccgaatggcagtaccag
gggccctgggcgctgctgcgcatgatggcggcccacggttccacgctgcgccagccgaat
gtcgactacaccgaattccccctgagcctggaagtgccggtgcacgcccagcccgaggaa
gacaaccagacgcggatgttcctgcgcctgtcgctgatgagccaggggggcaaggcgccc
ctgtccattcatccgctgccggtccaggcgccgtcatcccccctcggctacgcctcgcgt
gccgtggtcgattcaggagatctaccatga

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