Pseudomonas sp. NyZ201: ACPFMA_15685
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Entry
ACPFMA_15685 CDS
T11215
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02025
Biofilm formation - Pseudomonas aeruginosa
psny03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACPFMA_15685 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
ACPFMA_15685 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psny02044
]
ACPFMA_15685 (tssH)
Secretion system [BR:
psny02044
]
Type VI secretion system
Imp/Vas secretion system core components
ACPFMA_15685 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
Clp_N
AAA_22
AAA_16
nSTAND3
Zeta_toxin
AAA_25
NBD_SMAX1
AAA_7
T2SSE
AAA_14
ResIII
NACHT
ClpB_D2-small
Sigma54_activat
Rab11-FIP3
HAUS-augmin3
Dsc3_C
RelB_like_antitoxin
Motif
Other DBs
NCBI-ProteinID:
XRQ36476
LinkDB
All DBs
Position
3539382..3541940
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AA seq
852 aa
AA seq
DB search
MELGSLIACLNPDTRDALERAAQRCLQRGHHFVEVEHFLLELLEIQGGDLACLLPPFKVE
RDALAEQINRALELFKSGNTRTPSLSAQTIDLLKETVLQASIRGGGQRIRSGQLLLTLLE
REALRSQLLNSAAGLLAIPLDSLRARFQELTRSSREQPAEPAPSKRGKGAANSSEDPILE
QYTQDLTADARAGRIDPIIGREGEIRQCIDILLRRRQNNPILVGAPGVGKTALVEGLALR
IAAGDVPPALQDVCLRVLDLGLLQAGAGVKGEFEQRLKGVIDAVRSSPSPTIMFIDEAHT
LIGAGGAEGGSDAANLLKPALARGELRTLAATTWQEYKKYFEKDPALARRFQLVQVEEPS
EATCVQMLRGIAARLEQHHGVLVLDSAIQDAVKLSHRYISGRQLPDKAISILDTACARVA
LGQHDVPPPLENLRHRQHSLDEELQRLRREQATGQDHRDRITTLETELTLNQDAMRELES
RWSEEREAVRELLETRRELLALSEKADADGERRDPDTDSRIDYLAAELLRLEAGLDAIRQ
DDPLVPEQVDSKIVAAVIAGWTGIPVGKMLADEAHAVRTLGQRMGQRVMGQKAALDTIAQ
RLQAYRAGLTDPQKPVGVFLLPGPTGVGKTETAYALADALYGGERNLISINLSEYQEAHT
VSQLKGAPPGYVGYGSGGVLTEAVRRKPYSVVLLDEIEKAHPDVLEAFYNVFDKGVMEDG
SGLIVDFKNTVMLATSNVGAELILDTAKADLDGDAFNERLHKVLLQAFRPAFLARMTVVP
YHPLDEATLEGIVLAKLEKLRERYKAATGKQFDFDRGIVKAVLGKCSGAGARDIENVLMK
QVTGKLAEWALE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaactcggcagcctgatcgcctgtttgaacccggatacccgcgacgccctggagcgc
gccgcccagcgctgcctgcagcgcggccatcatttcgtcgaggtggagcactttctcctc
gaactgctggaaatccagggcggtgacctggcctgcctgctgccgcccttcaaggtcgag
cgcgacgcgctggccgagcagatcaaccgggccctggagctgttcaagtcgggcaatacc
cgcacgccatcgctgtcggcgcagaccatcgacctgctcaaggaaaccgtgctccaggcc
agtattcgcggcggcggacagcgtatccgctccgggcaactgctgctgaccctgctggag
cgcgaggcgttgcgcagccagttgctcaacagcgccgccggcctgctggccatcccgctg
gacagcctgcgcgcacggttccaggaactgacccgcagttcccgcgagcaaccggccgag
ccagcgccgtccaagcgtggcaagggcgcggcgaacagcagcgaagatccgatcctcgag
caatacacccaggacctcaccgccgacgccagggccggccgcatcgacccgatcatcggt
cgcgaaggcgagatccgccaatgcatcgacatcctcctgcgccgccggcagaacaacccg
atcctggtcggtgcgccgggcgtgggcaagaccgcgctggtcgaaggcctggcgctgcgc
atcgccgccggcgacgtaccaccggccctgcaggacgtttgcctgcgggtactcgacctc
ggcctgctgcaggccggggccggggtcaagggcgaattcgagcaacgcctcaagggcgtg
atagacgccgtgcgcagctcacccagcccgaccatcatgttcatcgacgaggcccatacc
ctgatcggcgccggcggcgccgaaggtggcagcgatgcggccaacctgctcaagccggcc
ctggcccggggcgagctgcgtaccctggccgcgaccacctggcaggaatacaagaaatac
ttcgagaaggacccggccctggcccgacgcttccagctggtccaggtggaagaaccgagc
gaagccacctgcgtgcagatgctgcgtggcatcgccgccaggctggagcagcaccacggc
gtgctggtgctggacagcgccatccaggacgcggtgaagctgtcgcaccgctacatttcc
gggcgccagctgccggacaaggccatcagcatcctcgacaccgcttgcgcccgggttgcc
ctcggccagcacgacgtgccgccgcccctggaaaacctgcgccaccgccagcacagcctc
gatgaagaactgcagcgcctgcgtcgcgagcaggccaccggccaggatcaccgcgaccgc
atcaccaccctggaaaccgaactgaccctcaaccaggacgccatgcgcgagctggaaagc
cgctggagcgaagaacgcgaagccgtgcgcgagttgctcgagacccgccgcgagctgctg
gcgctgagcgagaaggccgacgccgacggcgagcgccgcgatcccgacaccgacagccgc
atcgattacctggccgccgaactgctgcggctcgaggcgggcctggatgccattcgccag
gatgatccgctggtacccgagcaggtcgactcgaagatcgtcgctgcggtgatcgccggc
tggaccggtatcccggtgggcaagatgctcgcggacgaagcccatgccgtgcgtaccctc
ggccagcgcatgggccagcgggtgatgggccagaaagccgcgctggatactatcgcccag
cgcctgcaggcctaccgtgccggcctgaccgacccacagaaaccggtcggcgtgttcctc
ctgcccggccccaccggcgtgggcaagaccgagaccgcctacgccctggccgacgccctg
tacggtggcgagcgcaacctgatcagcatcaacctgtccgagtaccaggaagcccacacc
gtcagccagctcaagggcgccccgcccggctatgtcggctacggcagcggcggcgtgctc
accgaagcggtgcggcgcaaaccctattcggtggtgctgctggacgagatcgaaaaggcc
cacccggatgtgctggaagccttctacaacgtcttcgacaagggcgtcatggaagacggc
agcggcctgatcgtcgatttcaagaacaccgtgatgcttgccaccagcaacgtcggtgcc
gagctgatcctcgacacggcgaaggccgacctggacggtgacgcgttcaacgagcgcctg
cacaaggtgctgttgcaggccttccgcccggcgttcctggcgcggatgaccgtggtgccc
taccacccgctggacgaggccacgctggaaggtatcgtcctggccaagctggagaaactg
cgcgaacgctacaaggccgccaccggcaagcagttcgacttcgaccgcggcatcgtcaag
gcggtactcggtaaatgcagcggcgccggagcacgggatatcgaaaatgtgctgatgaag
caggtcaccggaaaactggcggagtgggcgcttgagtaa
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