Pseudomonas sp. NyZ201: ACPFMA_18335
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Entry
ACPFMA_18335 CDS
T11215
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACPFMA_18335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_18335
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ACPFMA_18335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
XRQ36978
LinkDB
All DBs
Position
complement(4138511..4139344)
Genome browser
AA seq
277 aa
AA seq
DB search
MPRAIWKGAISFGLVHIPVALASAVRSQRVDFDWLDQRSMDPVGYKRINKVTGKEISKEH
IVKGVEYEKGRYVVISEDEIRKARPEATQTIDIFSFVNAGDIPLQHFDTPYYLAPDKRGG
KVYALLRDTLESTGKVALATVVLHTQQHLALVRPLDEALVLITLRWPDEVKDLDSLELDD
SVTHAKVSKAELDMAKRLVKDMSGSWTPEDYRDEFRQTIMDLVEEKASKGKISVVEQPGE
EGEGKGADIIDLTELLKRSLGGKAKPAPKKKTSRKAS
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgcaatctggaagggcgcgatcagcttcggcctggtgcatatcccggtcgcc
ctggcatccgccgtgcgcagccagcgggtcgatttcgactggctcgaccaacgcagcatg
gacccggtgggctacaagcggatcaacaaggtcaccggcaaggaaatcagcaaggaacat
atcgtcaagggtgtggaatacgagaagggccgctatgtggtgatcagcgaggacgagatc
cgcaaggcccggccggaggcgacccagaccatcgatatcttttctttcgtcaatgccggg
gacattcccttgcagcacttcgacacgccttactacctggcgccggacaagcgcggcggc
aaggtctacgccttgcttcgcgatacgctggaaagcaccggcaaggtggccttggccacg
gtggtgctgcatacccagcagcatttggcacttgtgcggccactggacgaggcgctggtg
ctgattaccttgcgctggccagacgaagtgaaggacctcgacagcctggagctggatgac
agcgtgacccatgccaaggtcagcaaggccgaactggacatggccaagcgcctggtcaag
gacatgagcggcagctggacacccgaggattaccgcgacgagtttcgccagaccatcatg
gacctggtggaagaaaaggcctccaagggcaagatcagcgtggtcgagcaaccgggcgag
gaaggcgagggcaagggcgccgatatcatcgacctcaccgaactgctcaagcgcagcctg
ggtggcaaggccaagccggcgccgaagaagaagacgtcgcgcaaggcctcttga
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