Pseudomonas sp. NyZ201: ACPFMA_18410
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Entry
ACPFMA_18410 CDS
T11215
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
psny Pseudomonas sp. NyZ201
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psny03000
]
ACPFMA_18410
Transcription factors [BR:
psny03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACPFMA_18410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA
DUF815
Mg_chelatase
HTH_1
HTH_23
AAA_2
HTH_30
nSTAND3
AAA_16
TIP49
MCM
HTH_28
HTH_7
HTH_29
TsaE
Motif
Other DBs
NCBI-ProteinID:
XRQ36992
LinkDB
All DBs
Position
4155317..4157221
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AA seq
634 aa
AA seq
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MTRHSAQPHPSELAAFVSEHFPGRAIRPDGLIAQSWYRSVVQHRLDPGTATRLDILSAAD
IRRHQQQHQEYLAIAGQGVSGLARRVVPAGFAVLLSDEQGITLDARLPREHTPYVRSGLV
VGARWDESIAGTNGIGTTLAAAEPLIIHRQEHFLDANAALSCSVAPIFDAQGLLRGCLNA
TCLNSDGPKESQYLTLQLVILYARLIENAHFRQSYRDRLSLSLKPIDEITDLANEQLLAL
DDEGRVIGANHAAFVAHDSNADGRLIGSLIDRLLPMAVDDLLRQTHGGARGLRLRARHDD
TLLDLSLRIPSARHGLAQTPAPAPTRARPPRHPDLERLAGADPTLQHSVQRLRKVLDKDI
AILITGETGTGKEAFARAIHQASARRGGPFVALNCAAIPESLIESELFGYRGGSFTGAEK
KGMKGKLELANGGTLFLDEIGDMPAHLQTRLLRVLAEREISPIGAATPVALDIQVICATH
QDLQAMLRDKGFREDLFYRLNGMHLRLPPLRERSDRGHLLDAQLAAQGMRITAQARQCLL
DAPWPGNIRQLLNALRYAVALAENGCIDLDCLPEDLLQGSPAPSGSHSQGEDLLAVLRRH
RWNISAAASELGVARSTLYRQMKKQGLVQPNDRF
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcatagcgcgcagccccatcccagtgaactcgcggccttcgtcagcgagcat
tttcctggtcgagcgattcgtccggacgggttgatcgcccagtcctggtatcgcagcgtg
gtccagcacaggctcgacccaggcacggccacgcgcctggatatcctcagcgctgcggat
atccgccgccaccagcagcaacaccaggagtacctcgccatcgccggccagggcgtcagc
ggcctggcccggcgcgtggtcccggcgggctttgcggtgctgctcagcgatgagcagggc
atcaccctcgacgcccgcctgccccgtgaacacacgccgtatgtacgctccggactggtg
gtcggggcgcgctgggacgagtccatcgccggtaccaacggcatcggtaccaccctggcc
gccgccgagccgctgatcattcaccgccaggagcattttctcgacgccaatgccgcgctc
agttgctcggtggctccgatcttcgatgcccagggcctgcttcgtggctgcctgaatgcc
acctgcctgaacagcgacgggcctaaggaaagccagtacctgaccctgcaactggtgatc
ctgtacgcccgcctgatcgagaacgcgcatttccgccagagctacagggatcggctcagc
ctttccctgaagcctatcgacgaaatcaccgacctggccaacgaacaattgctggccctg
gacgacgagggtcgggtcatcggtgccaaccacgcagcctttgtcgcccacgacagcaat
gccgacggccgcttgatcggcagcctgatcgaccgtttgctgcccatggcggtcgatgac
ctgctgcgccagacccacggcggcgcccgcggcctgcgcttgcgcgcccggcatgacgac
acgctgctggacctgagcctgcgcattccctcggccaggcacggcctggcacagacaccg
gcaccggcgccgactcgcgcccggccaccccgccaccccgacctggaacgcctggccggt
gccgacccgacgttgcagcacagcgtgcagcgcctgcgcaaggtcctcgacaaggacatc
gccatcctgataaccggtgaaaccggtaccggaaaggaagccttcgcccgcgccatccac
caggccagtgcgcgccggggcgggcctttcgtcgcgctcaattgcgcggcgattccggaa
agcctgatcgaaagcgagctgttcggctaccgcggcggcagcttcaccggggccgagaaa
aaaggcatgaagggcaagctggaactggccaatggcggcaccttgttcctcgatgaaatc
ggcgatatgcctgcgcatctgcaaacgcgcctgctgcgggtgctggccgaacgcgagatc
tcgcctatcggtgctgcgacaccagtggcgctggatatccaggtgatctgcgcaacccac
caggacctgcaggccatgctgcgcgacaagggctttcgcgaagacctgttctatcgcctc
aacggcatgcacctgcgcctgccacccttgcgcgaacgcagtgatcgcggacacctgctg
gatgcacagctcgcagcccagggcatgcgaatcaccgcccaggcgcgccagtgcctgctc
gatgcgccatggcccgggaatatccgccagttgctcaatgccctgcgctatgcggtggcc
ctggcggagaacggctgtatcgacctggattgcctgccggaggacctcctgcaaggcagc
cctgcgccttcaggcagccactcgcaaggcgaggacctgctggcggtcctgcgccggcat
cgctggaacatcagcgcagcggcgagcgaactgggtgtagcgcgctcgacgctgtatcgg
cagatgaaaaagcaggggctggtgcagcccaatgaccggttttga
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