Pseudomonas sp. NyZ201: ACPFMA_19335
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Entry
ACPFMA_19335 CDS
T11215
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00300
Lysine biosynthesis
psny00470
D-Amino acid metabolism
psny01100
Metabolic pathways
psny01110
Biosynthesis of secondary metabolites
psny01120
Microbial metabolism in diverse environments
psny01230
Biosynthesis of amino acids
Module
psny_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ACPFMA_19335 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ACPFMA_19335 (dapF)
Enzymes [BR:
psny01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ACPFMA_19335 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XRQ37167
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All DBs
Position
4359998..4360813
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AA seq
271 aa
AA seq
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MPLSFYKMHANGDDFVIVDARTAQVPITEHLARKMGDRNRGVGFNQLALLRACDDADAQL
LFWNADGSPLDTCGSATRGAADILMRESDTSSVVLRTNRGRLTCARTATGEISVSMGQPM
LDWADIPLARELDTASLPIAGNPAAVSMGNPHCTYFVDDLAAVDVAAVGPALEKNLLFPA
RTNVHFVQVINRQHIRLRIWERGGGVPQGSGSCSCGAAVNGIRRGLLDNVVRVECDGGSV
TVQWDGVGAVVLTGPVEMLFFGKLAEGFLNR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgagtttttacaagatgcacgccaacggcgacgactttgtaatcgtcgacgcc
agaaccgcccaagtcccgatcaccgaacacctcgcccgcaaaatgggtgaccgcaaccgg
ggtgtcggcttcaatcaactggccctactgcgcgcctgtgatgacgccgatgcgcagctg
ctgttctggaatgccgacggctcccccctggacacctgcggaagcgcaacccgcggtgcc
gccgatatcctcatgcgcgaaagcgacacctcgtccgtagtcttgcgaaccaaccgtggc
cgcctcacctgcgcgcgaaccgccaccggcgagatctcggtcagcatggggcaaccgatg
ctcgactgggccgatatccctttggcgcgagaactggataccgcctccttgcccattgcc
ggcaatcctgccgccgtgagcatgggcaacccgcactgcacctattttgtggacgacctg
gcggcggtggacgttgccgccgttgggcctgcgctggaaaagaacctgctgtttcccgcc
aggacaaatgtgcacttcgtccaggtcatcaaccgacagcacatccggttgcgtatctgg
gagcgaggcggaggcgtgccccagggttcaggctcgtgctcatgtggcgctgcggtgaat
ggcattcgccgtgggttgctggataacgtggtcagggtcgaatgtgatggcgggagtgtc
acggttcagtgggatggggtcggcgccgtggtgctgactggcccggtggaaatgttgttc
ttcgggaaactggcggagggcttcttgaaccgctga
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