KEGG   Pseudomonas sp. NyZ201: ACPFMA_19335
Entry
ACPFMA_19335      CDS       T11215                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psny  Pseudomonas sp. NyZ201
Pathway
psny00300  Lysine biosynthesis
psny00470  D-Amino acid metabolism
psny01100  Metabolic pathways
psny01110  Biosynthesis of secondary metabolites
psny01120  Microbial metabolism in diverse environments
psny01230  Biosynthesis of amino acids
Module
psny_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psny00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    ACPFMA_19335 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    ACPFMA_19335 (dapF)
Enzymes [BR:psny01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     ACPFMA_19335 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: XRQ37167
LinkDB
Position
4359998..4360813
AA seq 271 aa
MPLSFYKMHANGDDFVIVDARTAQVPITEHLARKMGDRNRGVGFNQLALLRACDDADAQL
LFWNADGSPLDTCGSATRGAADILMRESDTSSVVLRTNRGRLTCARTATGEISVSMGQPM
LDWADIPLARELDTASLPIAGNPAAVSMGNPHCTYFVDDLAAVDVAAVGPALEKNLLFPA
RTNVHFVQVINRQHIRLRIWERGGGVPQGSGSCSCGAAVNGIRRGLLDNVVRVECDGGSV
TVQWDGVGAVVLTGPVEMLFFGKLAEGFLNR
NT seq 816 nt   +upstreamnt  +downstreamnt
atgcccctgagtttttacaagatgcacgccaacggcgacgactttgtaatcgtcgacgcc
agaaccgcccaagtcccgatcaccgaacacctcgcccgcaaaatgggtgaccgcaaccgg
ggtgtcggcttcaatcaactggccctactgcgcgcctgtgatgacgccgatgcgcagctg
ctgttctggaatgccgacggctcccccctggacacctgcggaagcgcaacccgcggtgcc
gccgatatcctcatgcgcgaaagcgacacctcgtccgtagtcttgcgaaccaaccgtggc
cgcctcacctgcgcgcgaaccgccaccggcgagatctcggtcagcatggggcaaccgatg
ctcgactgggccgatatccctttggcgcgagaactggataccgcctccttgcccattgcc
ggcaatcctgccgccgtgagcatgggcaacccgcactgcacctattttgtggacgacctg
gcggcggtggacgttgccgccgttgggcctgcgctggaaaagaacctgctgtttcccgcc
aggacaaatgtgcacttcgtccaggtcatcaaccgacagcacatccggttgcgtatctgg
gagcgaggcggaggcgtgccccagggttcaggctcgtgctcatgtggcgctgcggtgaat
ggcattcgccgtgggttgctggataacgtggtcagggtcgaatgtgatggcgggagtgtc
acggttcagtgggatggggtcggcgccgtggtgctgactggcccggtggaaatgttgttc
ttcgggaaactggcggagggcttcttgaaccgctga

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