Pseudomonas sp. NyZ201: ACPFMA_19690
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Entry
ACPFMA_19690 CDS
T11215
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02020
Two-component system
psny02025
Biofilm formation - Pseudomonas aeruginosa
psny02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPFMA_19690 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
ACPFMA_19690 (fliA)
09142 Cell motility
02040 Flagellar assembly
ACPFMA_19690 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psny03021
]
ACPFMA_19690 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
psny02035
]
ACPFMA_19690 (fliA)
Transcription machinery [BR:
psny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACPFMA_19690 (fliA)
Bacterial motility proteins [BR:
psny02035
]
Flagellar system
Flagellar assembly proteins
Stator
ACPFMA_19690 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
MarR_2
GerE
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
XRQ37235
LinkDB
All DBs
Position
complement(4439904..4440644)
Genome browser
AA seq
246 aa
AA seq
DB search
MNASGYRMYSKSSRDAQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVA
NKYDSSKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELQLSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASAQLEPSRDLEDE
RFQAALADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRL
GEWRAR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagcggctaccggatgtacagcaagtcctcgcgtgacgcccagtacgagctg
atcgagcgctatgcgccgctggtcaagcgcatcgcctaccacctgctggcgcggctgccg
gccagcgtgcaggtggaggacctgatccaggcgggaatgatcggcctgctcgaagtcgcc
aacaagtacgactcgagcaagggcgccagtttcgagacctacgccggcatccgtatccgt
ggcgccatgctcgatgaagtgcgcaagggcgactgggcaccgcgctcggtgcaccgcaat
acccgcatggtcagcgacgcaattcgggcaatcgaagcaaaaaccggccgtgacgctaaa
gatcacgaggttgctgccgaactccaattgagtctcgatgattactacgggattttgaac
gataccttgggcagccgcctgttcagcttcgacgacctgctgcaggacggcgagcatgaa
gggctgcacgaggacggcgccagtgcccagctcgagccttcgcgcgatctggaggacgaa
cgcttccaggcagccctggccgatgccatcgccaacctgccggaacgcgaacgcctggtc
ctggcgctgtactacgacgaagagctaaacctcaaggaaatcggtgaggtcctgggggtc
agcgaatcgcgcgtcagccagttgcatagccagtgcgcggcccgcctgcgcagccggttg
ggggaatggcgggcgcgttga
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