Pseudomonas sp. NyZ201: ACPFMA_20715
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Entry
ACPFMA_20715 CDS
T11215
Symbol
fadD1
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00061
Fatty acid biosynthesis
psny00071
Fatty acid degradation
psny01100
Metabolic pathways
psny01212
Fatty acid metabolism
psny02024
Quorum sensing
psny04146
Peroxisome
Module
psny_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
ACPFMA_20715 (fadD1)
00071 Fatty acid degradation
ACPFMA_20715 (fadD1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
ACPFMA_20715 (fadD1)
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACPFMA_20715 (fadD1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psny01004
]
ACPFMA_20715 (fadD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psny04147
]
ACPFMA_20715 (fadD1)
Enzymes [BR:
psny01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
ACPFMA_20715 (fadD1)
Lipid biosynthesis proteins [BR:
psny01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
ACPFMA_20715 (fadD1)
Exosome [BR:
psny04147
]
Exosomal proteins
Exosomal proteins of breast milk
ACPFMA_20715 (fadD1)
Exosomal proteins of breast cancer cells
ACPFMA_20715 (fadD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF3710
DUF599
Motif
Other DBs
NCBI-ProteinID:
XRQ37425
LinkDB
All DBs
Position
complement(4665291..4666988)
Genome browser
AA seq
565 aa
AA seq
DB search
MIENFWKDKYPAGVASQINPDEYPNIQAVLKQSCQRFADKPAFSNLGKTLTYGELYELSG
AFAAYLQQHTDLQPGDRIAVQLPNVLQYPVAVFGAMRAGLIVVNTNPLYTAREMEHQFND
SGAKALVCLANMAHLAEKVVPKTSVKHVIVTEVADLLPPLKRLLINSVIKYVKKMVPAYS
LPNAVKFNDALAKGQGKAVREASPSHDDVAVLQYTGGTTGVAKGAMLTHRNLIANMLQCK
ALMGSNLNEGCEILITPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELSKWK
FSGFVGLNTLFVALCNNEDFRRLDFSALKVTLSGGMALQLSVAERWREVTGCAICEGYGM
TETSPVASVNPAQNIQVGTIGIPVPSTLCRVIDDAGNELPFGEIGELCIKGPQVMKGYWQ
RQEATDEILDAEGWLKTGDIAVIQADGYMRIVDRKKDMILVSGFNVYPNELEDVLATLPG
VLQCAAIGVPDEKSGEVIKVFIVAKPGVTLTREQVMEHMRANVTGYKVPRFVEFRDALPT
TNVGKILRRELRDEELKKLGLKKIA
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaaacttttggaaggataagtacccggccggggtcgcctcgcaaatcaacccg
gacgagtacccgaatatccaggcagtattgaagcagtcctgccagcgtttcgccgataaa
ccggcattcagcaacctgggcaagaccttgacctatggcgagctgtacgagttgtccggg
gccttcgctgcctacctgcagcagcataccgacctgcaacccggagaccgcatcgccgtt
caactgccgaacgttctgcaatatcccgtcgccgtcttcggtgccatgcgcgccgggctg
atcgtggtcaacaccaacccgctctacacggcgcgggaaatggaacaccagttcaacgac
tccggcgccaaggccctggtgtgcctggccaacatggcgcacctggcggaaaaggtcgta
cccaagacgtcggtcaagcacgtcatcgtcacagaagtcgccgatctgctgccgccgctc
aagcgcctgctgatcaacagcgtcatcaagtacgtgaagaagatggtcccggcctacagc
ctgccgaacgccgtgaagttcaacgacgcactggcgaaagggcagggcaaggcggtcagg
gaagcctcgccgtcccacgacgatgtcgcggtgctgcaatacaccggcggcaccaccggt
gtggccaagggcgccatgctgacccaccgcaacctgatcgccaacatgctgcagtgcaag
gcgcttatgggctccaacctcaatgagggctgcgagatcctgatcaccccgctgccgctc
tatcacatctatgccttcaccttccattgcatggcgatgatgttgatcggcaaccacaac
atcctgatcagcaacccgcgcgacctgccggcgatggtcaaggaactgtcgaagtggaag
ttcagcggtttcgtcgggctcaacaccctgttcgtcgccctgtgcaacaacgaggacttc
cgtcgcctggacttctccgcgctaaaggtcaccctgtccggtggcatggccctgcaactc
tcggttgccgagcgctggcgcgaagtgaccggctgcgccatctgcgaaggctacggcatg
accgaaaccagcccggtggcctcggtgaacccggcgcagaacatccaggtcggcaccatc
ggcatcccggtaccttcgaccctgtgcagggtgatcgacgatgccggcaacgagttgccg
ttcggcgagatcggcgagctgtgcatcaagggcccgcaggtcatgaaaggctactggcag
cgccaggaggccaccgacgagatcctcgacgccgagggctggctgaagaccggcgacatc
gcggtgatccaggccgatggctacatgcgcatcgtcgaccgcaagaaggacatgatcctg
gtgtccggtttcaacgtgtacccgaacgaactcgaggatgtgctggcgaccctgccgggc
gtgctgcaatgtgctgcgatcggcgtgccggacgagaagtcgggcgaggtgatcaaggtg
ttcatcgtggccaagccgggggttaccctgacccgcgagcaggtgatggagcatatgcgc
gccaatgtcaccggctacaaggtgccgcgtttcgtcgagttccgtgatgccctgccgacc
accaacgtcggcaagatcctgcggcgagagttgcgcgatgaagagttgaagaagctgggc
ctgaagaagatcgcctga
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