Pseudomonas sp. NyZ201: ACPFMA_22340
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Entry
ACPFMA_22340 CDS
T11215
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psny Pseudomonas sp. NyZ201
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psny03009
]
ACPFMA_22340 (rimO)
Enzymes [BR:
psny01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ACPFMA_22340 (rimO)
Ribosome biogenesis [BR:
psny03009
]
Prokaryotic type
ribosomal protein modification factors
ACPFMA_22340 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Matrix_Paramyxo_N
Moricin
Motif
Other DBs
NCBI-ProteinID:
XRQ37726
LinkDB
All DBs
Position
4982964..4984301
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AA seq
445 aa
AA seq
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MSTTDTPTTPKVGFVSLGCPKALVDSERILTQLRMEGYEVVPTYQDADVVVVNTCGFIDS
AKAESLEVIGEAIKENGKVIVTGCMGVEEGNIRDVHPSVLAVTGPQQYEQVVSAVHEVVP
PRQDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEVLSE
AERLVKAGVKEILVISQDTSAYGVDVKYKTDFWNGRPVKTRMLELCEALSSLGAWVRLHY
VYPYPNVDDVIPLMAAGKILPYLDIPFQHASPKVLKAMKRPAFEDRTLARIKKWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANDLGLDEVPDEIK
QDRWDRFMAHQQAISSARLQLRIGREIEVLIDEVEEQGSVGRSFFDAPEIDGNVFIDGNH
GYKPGDKVRCRVVDADEYDLWAEPV
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgaccgatactcccaccacgccgaaggtaggatttgtctcactcgggtgcccg
aaggctctcgtcgactccgagcgcatcctcacccaactgcggatggaaggctacgaagtc
gtgcccacctatcaggacgctgacgtggtggtggtcaacacctgcggcttcatcgattcg
gccaaggccgagtccctggaagtgatcggcgaagccatcaaggaaaacggcaaggtcatc
gtcaccggctgcatgggcgtcgaggaaggcaacatccgcgatgtgcatccgagcgttctg
gccgtgaccggcccgcagcagtacgagcaggtggtcagcgccgtgcacgaggtggttcca
ccgcgtcaggaccacaacccgttgatcgatctggtgccgccacagggcgtcaagctgaca
ccgcgccactacgcctacctgaagatttccgaaggctgcaaccatagctgcagcttttgc
atcatcccgtcgatgcgtggcaagctggtcagccgcccggttggcgaagtgctcagcgag
gccgagcgcctggtcaaggccggggtcaaggaaatcctggtgatttcccaggacaccagc
gcctacggcgtcgacgtcaagtacaagaccgacttctggaacggtcgcccggtcaagacc
cgcatgctggaattgtgcgaagccctgagcagcctgggcgcctgggttcgcttgcactat
gtctatccatacccgaacgtggacgacgtgatcccgctgatggctgccggcaagatcctg
ccgtacctggatatcccgttccagcacgccagcccgaaagtgctcaaggccatgaaacgc
ccggccttcgaagaccggaccctggcgcgcatcaagaaatggcgcgaacagtgcccggac
ctgatcattcgctccaccttcatcgtcggcttccccggtgaaaccgaagaagacttccag
tacctgctggactggctcaccgaagcacagctcgaccgcgttggctgcttccagtactca
cccgtcgaaggcgcgccggccaacgacctgggcctggacgaagtcccggacgagatcaag
caggaccgctgggaccgcttcatggctcatcaacaggccatcagcagcgcccgcctgcaa
ctgcgcatcggccgtgagatcgaagtgctgatcgacgaagtcgaggagcaaggttcggtg
ggtcgcagcttcttcgacgcaccggaaatcgatggcaacgtgttcatcgatggcaaccat
ggctacaagcccggcgacaaggtgcgctgccgggtagtggatgccgatgagtacgacctc
tgggccgagcctgtctaa
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