Pseudomonas sp. NyZ201: ACPFMA_22535
Help
Entry
ACPFMA_22535 CDS
T11215
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
psny Pseudomonas sp. NyZ201
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psny03016
]
ACPFMA_22535 (truD)
Enzymes [BR:
psny01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ACPFMA_22535 (truD)
Transfer RNA biogenesis [BR:
psny03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACPFMA_22535 (truD)
Prokaryotic type
ACPFMA_22535 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
E3_binding
Motif
Other DBs
NCBI-ProteinID:
XRQ37761
LinkDB
All DBs
Position
complement(5016033..5017091)
Genome browser
AA seq
352 aa
AA seq
DB search
MNELELLGPRASGPALGSAVLKAVAEDFQVDEVLDIPLSGQGEHLWLWVEKRDLNTEEAA
RRLARAAGVPLKTISYAGLKDRQALTRQWFSLHLPGKADPDFTAAENESLRILERTRHSR
KLQRGAHSANGFTLRLTRLQADHAALDARLERLRAQGVPNYFGAQRFGHDGGNVEEARHW
AERKALPEQRNLRSRLLSSARSYLFNRVLAQRVEDGSWQRAQIGDLLAFTDSRSFFPAGE
SECSDPRLGILDLHPTGPLWGEGLPATQGAAGALEQRVGEENPALCEWLGHAAMKQERRI
LRLPIGRLTWHYPEPDILQLEFVLPAGCFATVVVRELVDLVPAGQTDSPCVF
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaactcgaactgctcggcccgcgcgccagcgggccggcgctgggcagcgcggta
ctgaaagcggtggcggaggatttccaggtcgatgaagtgctggacatcccgctgtccggc
cagggcgaacacctgtggttgtgggtggaaaagcgcgatctcaataccgaggaagctgcc
cgccgcctggcccgtgccgccggtgtgccgctgaagaccatcagctatgccggcctcaag
gatcgccaggccttgacccgccagtggttcagcctgcatctgccgggcaaggccgatccc
gatttcactgccgccgaaaatgaaagcctgcgcatcctcgagcgcacccggcattcacgc
aagctgcaacgcggtgcccattcggccaacggcttcaccctgcgcctgacccggctccag
gccgatcacgccgcgctcgatgcccgtctcgaacggctgcgcgcccaaggcgtcccgaac
tacttcggggcgcagcgctttggtcatgacggaggcaacgtcgaggaggcgcgccattgg
gccgaacgcaaggcgttgccggagcagcgcaacctgcgctcgcggttgctgtcgagcgcg
cgtagctacctgttcaaccgtgtcctcgcccagcgtgtcgaggatggcagttggcagcgt
gcgcagatcggcgacctgttggcgttcactgatagccgtagcttctttccggcaggtgag
tcggaatgcagcgatcctcgcctcggcattctcgacctgcatcccaccggtccgctctgg
ggtgaagggcttccagccacgcagggcgcggccggcgccctcgaacagcgtgtcggcgag
gagaatccggcactctgcgaatggcttgggcacgccgcgatgaagcaggaacgacgcatt
ctgcgactgcccattggtcggctgacgtggcattatcccgagcctgatatcctgcaactg
gaattcgtccttccggccggatgtttcgccaccgtggtggtgcgcgaactcgtcgatctg
gtcccggcagggcagacggacagcccatgcgtattctga
DBGET
integrated database retrieval system
