Pseudomonas sp. NyZ201: ACPFMA_23110
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Entry
ACPFMA_23110 CDS
T11215
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02024
Quorum sensing
psny03060
Protein export
psny03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
ACPFMA_23110 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
ACPFMA_23110 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACPFMA_23110 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psny02044
]
ACPFMA_23110 (ffh)
Enzymes [BR:
psny01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
ACPFMA_23110 (ffh)
Secretion system [BR:
psny02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
ACPFMA_23110 (ffh)
Eukaryotic Sec-SRP protein
ACPFMA_23110 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
YqeC
APS_kinase
cobW
AAA_33
AAA_16
AAA_31
ABC_tran
KTI12
nSTAND3
6PF2K
AAA_24
ParA
Thymidylate_kin
AAA_17
AAA_30
Mg_chelatase
AAA_5
SLFN-g3_helicase
AAA_28
TsaE
AAA_18
NACHT
Motif
Other DBs
NCBI-ProteinID:
XRQ37871
LinkDB
All DBs
Position
complement(5142812..5144188)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLNEDNIKDTLREVRMALLEADVALPVVKDFVNKVKERAV
GTEVSRSLTPGQAFVKIVQAELEELMGAANEDLSLNAAPPAVVLMAGLQGAGKTTTAGKL
ARFLKERKKKTVMVVSADVYRPAAIKQLETLANDIGVTFFPSDISQKPVAIAEAAIREAK
LKFIDVVIVDTAGRLHIDADMMTEIKDLHAAVKPVETLFVVDAMTGQDAANTAKAFGDAL
PLTGVVLTKVDGDARGGAALSVRAITGKPIKFIGMGEKTEALEPFHPDRIASRILGMGDV
LSLIEQAEQNIDKAKADKLAKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDLISGSRKRRIAIGSGTQVQDIGRLI
KQHKQMQKMMKKFSAKGGMAKMMRGLGGMMPGGGMPKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaacctgaccgatcgtctgtcacagacgctgcgccatgtcaccggcaaggcc
aagctgaacgaagacaacatcaaagacaccctgcgcgaagtgcgcatggcgttgctcgag
gccgacgtcgccctgccggtggtcaaggatttcgtcaacaaggtcaaggaacgtgcggtc
ggtaccgaggtttcccgcagcctgaccccgggccaggccttcgtgaagatcgtccaggcc
gaactcgaagaactgatgggcgcggccaacgaggacctgagcctgaacgccgcgccgcct
gccgtggtgctgatggccggtctgcagggtgcgggcaagaccaccactgccggcaagctg
gcgcgcttcctcaaggagcgcaagaagaagaccgtcatggtcgtctctgccgacgtctat
cgccctgcggcgatcaagcagctggaaaccctggccaacgacatcggcgtgaccttcttc
ccgtccgacatcagccagaagcccgtggccatcgccgaagcggcgatccgtgaagccaag
ctgaaattcatcgacgtggtcatcgtcgacaccgccggccgtctgcatatcgacgccgac
atgatgaccgagatcaaggacctgcacgctgcggtcaagccggtcgaaacgctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacacggccaaggccttcggcgatgccctg
ccgctgaccggcgtggtgctgaccaaggtcgacggtgacgcccgtggcggtgccgccctg
tcggtgcgtgccatcaccggcaaaccgatcaagttcatcggcatgggcgagaagaccgag
gccctggagccgttccacccggaccgtatcgcctcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgagcagaacatcgacaaggccaaggccgacaagctggcc
aagaagctgaagaagggcaagggcttcgatctcgaggacttccgcgaccagctgcaacag
atgaagaacatgggcggcctcggcggcctgatggacaagctgccgagcatcggcggggtc
aacctggcgcagatgggcaacgcccagggtgcggccgagaagcagttcaagcagatggaa
gcgatcatcaactcgatgaccccggccgagcgccgtgaccctgacctgatcagcggttcg
cgcaagcgccggatcgccatcggttccggcacccaggtgcaggacatcggccgcctgatc
aagcagcacaagcagatgcagaagatgatgaagaagttttctgccaagggtggcatggcc
aagatgatgcgcggcctgggcggcatgatgcccggcggcggcatgcccaagctgtaa
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