Pseudomonas sp. NyZ201: ACPFMA_24160
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Entry
ACPFMA_24160 CDS
T11215
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K07165
transmembrane sensor
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACPFMA_24160
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Gene cluster
GFIT
Motif
Pfam:
FecR
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
FecR_C
HTH_28
Sigma70_ECF
DUF2774
DUF2917
HTH_40
RibLong
Motif
Other DBs
NCBI-ProteinID:
XRQ38075
LinkDB
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Position
complement(5377582..5378835)
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AA seq
417 aa
AA seq
DB search
MAEPLDDALARARFLQVFLAQRGRMENLVRRRVGCRATAADLVQELFLRFWRRPQIGIEA
LESYLMRCAGNIAIDHLRSEGARERVNESLPEPLELPQESQPEAAFEASSDLRRIEAALR
ELPERTRQIFLLNRIHGRTYGEIAKVMALSQSAVEKHMMRALEACKASIANEPVPVRKAR
KLGGLATAAFLLLMLGTGAGWHPADWLRDLGADYVAPVGQIREVTLADNSHLVLDADTAI
RVDFSHGQRRIEVQRGAVFFHVSHTGQPFVVETEGGRTEVLGTQFEVRQQAGGAQVTVLS
GRVGVTAGAGQAQQVLTANQQVEYHDGQAGRVHGVDSQNSLAWRQGWLNYYEVPLSQVVD
DLARYYPGRIILLDRQLGARKVSGSFPGNDPLAALDALGAVTGFQRHTLFGRVTLLR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgctcgatgacgccctggcccgggcccgtttcctccaggtattcctggcc
cagcgcgggcgcatggaaaacctggtgaggcggcgggtcggttgccgggcgactgcggca
gacctggtgcaggagctgttcctgcgcttctggcggcgcccgcagatcgggatcgaggcc
ctggaaagctacctgatgcgttgtgccggcaatatcgccatcgaccatctgcgcagcgag
ggcgcccgcgagcgagtcaacgaaagcctccccgagccccttgaactgccgcaggaaagc
cagcccgaggcggcattcgaggccagcagcgacctgcgccggatcgaggcggccctgcgc
gagttgcccgagcgcacccggcagatctttctgctcaaccgtattcatggacgcacctat
ggcgagatcgccaaggtcatggcgctttcccaaagcgcggtggaaaaacacatgatgcgc
gccctcgaagcctgcaaggcgagcatcgccaacgagcccgtgccggtgcgcaaggcgcgc
aagctcggcggtcttgcaactgcggctttcctgctgctgatgctcggcaccggtgctggt
tggcatccggcggactggctgcgcgacctcggcgcggactatgtggcgccggtcgggcag
atacgcgaagtgaccctggccgacaactcgcacctggtgctggacgccgataccgccatc
cgcgtcgatttcagccacggccagcgtcgtatcgaggtgcagcgtggcgctgtgttcttc
catgtcagccacacgggccagccctttgtcgtcgagaccgaaggcggccgcaccgaggtg
ctgggcacgcagttcgaggtccgccagcaagccggcggggcgcaggtcacggtgctgtcc
gggcgggtcggggtcactgccggcgcagggcaggcgcagcaagtgcttacggccaaccag
caggtcgaataccacgacggccaggccggccgggtgcacggcgtcgatagccagaacagc
ctggcctggcgccagggctggctgaactactacgaggttccgctgagccaggtggtggat
gatctggctcgctactatcccggacgcatcatcctgctcgaccgccagctcggcgcgcgc
aaggtcagcggcagcttccccggcaacgacccgctggcagcccttgatgccctcggcgcg
gtgaccgggttccagcgccacacgctgttcggccgggtcaccttgctgcgttga
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