Pseudomonas sp. NyZ201: ACPFMA_26140
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Entry
ACPFMA_26140 CDS
T11215
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ACPFMA_26140 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psny03019
]
ACPFMA_26140 (orn)
03009 Ribosome biogenesis [BR:
psny03009
]
ACPFMA_26140 (orn)
Messenger RNA biogenesis [BR:
psny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACPFMA_26140 (orn)
Ribosome biogenesis [BR:
psny03009
]
Eukaryotic type
Pre-60S particles
RNases
ACPFMA_26140 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
XRQ38446
LinkDB
All DBs
Position
complement(5807357..5807899)
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AA seq
180 aa
AA seq
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MQNPQNLIWIDLEMTGLDPDHDVIIEMATIVTDSDLNTLAEGPVIAIHHSDEVLARMDDW
NTRTHGASGLTQRVRESTIDMAEAEARTIAFLEQWVPKGKSPICGNSICQDRRFLYRHMR
ALENYFHYRNLDVSTLKELAGRWAPEVKDGFKKGSTHLALDDIRESIAELQHYRKHFIKF
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacccacagaacctgatctggatcgacctggaaatgaccggtcttgatcctgat
catgacgtcatcatcgagatggcgaccattgtcaccgacagcgatctcaacaccctggcc
gaaggcccggtgatcgccattcaccacagcgacgaagtcctggcccgcatggacgactgg
aacacccggacccacggcgcttccggcctgacccagcgcgtgcgcgaaagcacgatcgac
atggccgaggccgaggcccggaccatcgccttcctcgaacaatgggtgccgaagggcaag
tcgccgatctgcggcaacagcatctgccaggaccggcgcttcctgtatcgccatatgcgc
gcgctggaaaactacttccactaccgcaacctggatgtctcgaccctgaaggaactggct
ggccgctgggcgccggaagtgaaggacggcttcaagaagggcagcacccacctggcgctg
gatgatattcgcgagtcgattgcggaactgcagcactaccgcaagcacttcatcaagttc
tga
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