Pseudomonas sp. NyZ201: ACPFMA_27185
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Entry
ACPFMA_27185 CDS
T11215
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny00521
Streptomycin biosynthesis
psny00523
Polyketide sugar unit biosynthesis
psny00525
Acarbose and validamycin biosynthesis
psny00541
Biosynthesis of various nucleotide sugars
psny01100
Metabolic pathways
psny01110
Biosynthesis of secondary metabolites
psny01250
Biosynthesis of nucleotide sugars
Module
psny_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ACPFMA_27185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ACPFMA_27185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
ACPFMA_27185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ACPFMA_27185 (rfbB)
00525 Acarbose and validamycin biosynthesis
ACPFMA_27185 (rfbB)
Enzymes [BR:
psny01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
ACPFMA_27185 (rfbB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
XRQ38643
LinkDB
All DBs
Position
6044797..6045879
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AA seq
360 aa
AA seq
DB search
MRILITGGAGFIGSALVRHLINDTDHEVLNLDKLTYAGNLESLNSIATNTRYEFVQADIV
DQATVSAVLERFQPHAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARGYWSKLPA
GEREAFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWHRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGNGLQVRDWLFVEDHARALFKVVT
EGVVGETYNIGGHNEQRNIDVVRGICALLEELAPQRPQGVASYADLITYVQDRPGHDQRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRHVQDGSYQGQRLGTTDFKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattctcatcaccggtggagccggtttcattggctcggcactcgtgcgtcacctg
atcaacgataccgaccatgaagtgctcaacctggacaagttgacctacgcgggcaacctg
gagtcgttgaacagcatcgccaccaatacccgctatgaattcgtccaggcggatatcgtt
gaccaggcaacggtcagcgcggtcctggagcgcttccagccccatgcgatcatgcacctg
gcggccgagtcgcacgtcgaccgttcaatcgacggcccctcggacttcatccagaccaat
atcgtcggcacctacagcctgctggaagcagctcgtggctactggtcgaaactaccggcc
ggcgaacgcgaagccttccgtttccaccacatctccaccgatgaggtctatggcgacctg
cacggcgtcgacgacctgttcaccgagaccacaccctacgcgccaagctcaccgtattcg
gcgagcaaggccgcgtccgatcatctggtccgcgcctggcaccgcacctatggcctcccg
gttctgctgaccaactgctcgaacaactacgggccgttccacttcccggaaaagctcatt
ccgctggtcatcctcaacgccctggcgggcaagccgctgccggtctatggcaatggcctg
caggtacgcgactggctgttcgtcgaggatcacgcccgcgccctgttcaaggtagtgacc
gagggtgtggtcggcgagacctacaacatcggcgggcacaacgaacaaaggaacatcgac
gtggtgcgcggcatctgcgccctgctcgaagaactggcgccacagcgtccgcagggcgtg
gccagctacgccgacctgattacctacgttcaggaccgtcccggccacgaccagcgctac
gcgatcgacgccagcaagatcgaacgcgagctgggctgggttcccgaagaaaccttcgag
accggcctgcgcaagaccgtccagtggtacctggataacctggaatggtgccgccatgtg
caggacggcagctaccagggacaacgcctgggcaccaccgacttcaaggatttgattgca
tga
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