Pseudomonas sp. NyZ201: ACPFMA_28055
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Entry
ACPFMA_28055 CDS
T11215
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACPFMA_28055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_28055
Enzymes [BR:
psny01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
ACPFMA_28055
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
ACPFMA_28055
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
CbiK
Motif
Other DBs
NCBI-ProteinID:
XRQ38809
LinkDB
All DBs
Position
6221078..6221857
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AA seq
259 aa
AA seq
DB search
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAYQLDGYFLYACDA
EVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFDKVSIATLLLPSGQNGDEDLN
QKFKLMDDFAKYLDKQRRKRREYIYCGSLYVAQQKLDIKNWRDSQQSPGFLAPERAWMDE
IVGNMGYVDALREVSREGDQYSWWPDNEQAEMLNLGYRFDYQLLTPGLRRFVRSARLPRQ
PRFSQHAPLIVDYDWTLTI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcatcagtgtgaacgttaatggcattcaggctgcggtcgagcgtggtttgctc
agctggctgcaagcccagaatgccgacgtcatctgccttcaggatacccgcgcttcggcc
tttgaactcgacgacccggcttatcagctcgatggctacttcctttatgcctgcgacgca
gaagtacccgcccaaggcggcgtggcactttattcgcggttgcagcccaaggcagtcatc
agcggcctgggcttcgagacagccgaccgctacggacgttacctgcaggccgatttcgac
aaagtcagtattgctaccttgctcctgccttccgggcagaacggcgacgaagacctgaac
cagaagttcaagttgatggacgacttcgccaagtacctggacaagcagcgtcgcaagcgc
cgtgaatacatctactgcggctcgctctacgtggcgcagcagaagctcgacatcaagaac
tggcgcgacagccagcagtcgccgggcttccttgcccccgagcgtgcctggatggacgag
atcgtcggcaacatgggttatgtcgatgccctgcgcgaagtcagccgcgaaggcgaccag
tacagctggtggccagacaacgagcaggccgagatgctcaacctgggctatcgcttcgac
taccagttgctgaccccgggcctgcgccgcttcgtgcgcagtgcacgcctgccacgccag
ccgcgcttctcgcagcacgcgccgctgatcgtggactacgactggacgctgacgatctga
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