Pseudomonas sp. NyZ201: ACPFMA_28410
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Entry
ACPFMA_28410 CDS
T11215
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03420
Nucleotide excision repair
psny03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACPFMA_28410 (uvrD)
03430 Mismatch repair
ACPFMA_28410 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_28410 (uvrD)
Enzymes [BR:
psny01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACPFMA_28410 (uvrD)
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACPFMA_28410 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ACPFMA_28410 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRQ38877
LinkDB
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Position
6296962..6299142
Genome browser
AA seq
726 aa
AA seq
DB search
MHDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSIL
SVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLLRAHWQEAGLVQNFQILDSDD
QGRLVKRVIRDLGLDEQRWPVRQAQWFINGQKDEGLRPHHIQVNGDLFLGTMRSIYEAYE
AACQRTGVIDFSELLLRALDLWRDHPGLLQHYSRRFRHLLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGARIENIQQFSSDFPDAELIRLEQNYRSTAGILKAANALIA
NNSGRLGKELWTEGGDGEPLNLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINVPPRGI
GEKTVETIREHARHAQLSMWEAMLQLLANKALKGRAASALGAFIELLDNLSAKVLDMPLH
LMTQTVIEQSGLIAYHQEEKGEKGQARVENLEELVSAARNFEPSEEDGELSALSAFLGHA
SLEAGDAQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGVTRAMQNLVMTYAETRRLYGSETYNKVSRFVREIPAGLVQEVRLSNSVSRPFGGAK
QTASSLFADANIPQTAFNLGQRVQHAVFGEGVILNFEGSGAQARVQVNFAEGSKWLMLGY
AKLEAI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacgacctctctctccttttgaattccctcaacgatgcccagcgccaggcggta
gccgcgccggtcgggcgtcagttggtcctggccggtgccggctccggcaagacccgcgtg
ctggtacaccgcatcgcctggttgatccaggtcgagcaggcctcgccgcactcgatcctg
tcggtgaccttcaccaacaaggccgccgccgagatgcgccaccgcatcgagcaactgctg
ggtatcaacccggcgggcatgtgggtaggcaccttccacggcctggcccatcgcctgttg
cgcgcgcactggcaggaagcaggtctggtacagaatttccagatcctcgacagcgatgac
cagggccgcctggtcaagcgggtgatccgcgacctcggcctcgacgagcagcgctggccg
gtgcgccaggcccagtggttcatcaacggacagaaggacgagggcctgcggccgcaccat
atccaggtcaatggcgacctgttcctcggcaccatgcgcagcatctatgaagcctatgaa
gccgcgtgccagcgcaccggcgtaatcgacttctccgagctgctgctgcgcgccctggac
ctgtggcgcgaccatccgggcctgttgcagcactattcccgccgcttccgtcatctgctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggctgcgcctgctggcgcag
ggtggcgacagcctgatggtggtgggcgacgacgaccagtccatctacggctggcgcggc
gcacggatcgagaacatccagcagttttccagcgacttccccgacgccgagctgatccgc
ctggagcagaactaccgctccaccgccggcatcctcaaggcagccaacgccctgatcgcc
aataacagcgggcgcctgggcaaggagctatggaccgagggcggcgacggcgagccattg
aacctttacgccgccttcaacgagcatgacgaagcccgctacgtggtggaaaccatcgaa
agcgcgttgaagaccggcctggcgcgcagcgatatcgccatcctgtaccgctccaacgcc
caatcgcgggtgctcgaagaagccctgctgcgcgagcgcattccctaccgcatctatggc
ggccagcgcttcttcgaacgcgccgagatcaagaacgccatggcctacctgcgtctgctc
gaaggccgcggcaacgacgcggcgctggagcgggtgatcaacgtgccgccccgcggcatc
ggcgaaaagactgtcgaaacgatccgcgagcatgcccgccatgcccagttgtcgatgtgg
gaagccatgctccagttgctggccaacaaggccctcaagggccgcgccgccagcgccctg
ggcgcgttcatcgagctgctggacaacctgtccgccaaagtcctcgatatgcccctgcac
ctgatgacccagacagttatcgagcagtccgggctgatcgcctatcaccaggaagaaaag
ggtgaaaagggccaggcacgggtagagaacctggaggagctggtcagcgccgcacgcaac
ttcgagcccagcgaggaagatggcgagctttccgcgctgtccgccttccttggccacgcc
tcgctggaggccggcgacgcccaggccgacgagcatgaagacagcatccagctgatgacc
ctgcacagtgcaaagggcctggagttcccctacgtgttcctggtgggcatggaggaaggc
ctgttcccgcacaagatgagcctcgaagagcccggccgtctcgaagaagaacgccgcctg
gcctatgtcggggtgacccgggccatgcagaacctggtcatgacctacgccgagacccgt
cgcctgtatggcagcgagacctacaacaaggtatcgcgcttcgttcgcgagattcctgcc
ggcctggtccaggaagtgcgcttgtccaacagcgtcagccgcccgttcggcggcgcgaag
caaaccgccagcagcctgttcgccgacgccaacatcccgcagaccgccttcaacctgggg
cagcgggtgcagcatgcggtattcggcgaaggcgtgatcctcaacttcgaaggctccggc
gcgcaggcacgggtccaggtgaatttcgccgagggcagcaagtggctgatgctcggctac
gccaagctcgaagcgatctag
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