Psychrobacter sp. G: PSYCG_04200
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Entry
PSYCG_04200 CDS
T02715
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
pso
Psychrobacter sp. G
Pathway
pso03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSYCG_04200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_04200
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSYCG_04200
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PSYCG_04200
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
Kinesin
DUF87
SWI2_SNF2
Microtub_bd
Collagen_bind_2
AAA_30
AAA
DUF8810
Motif
Other DBs
NCBI-ProteinID:
AGP48371
LinkDB
All DBs
Position
904820..906931
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AA seq
703 aa
AA seq
DB search
MRMPEPRSSRQLNQLATQLQGEAEISGVNASGTQISSRAFEMVTEFEPAGDQPQAIKKLV
NGINAGMDEQLLLGVTGSGKTYTMAKVISETQRPTIIMAHNKTLAAQLYGEFKSFFPNNA
VEYFVSYYDYYQPEAYVAASDTFIEKDSAINDHIDQMRLSATRALLERRDAIIVASVSCI
YGLGDPESYLKMLLHVVVGDKIDRTATIKRLVEMQYTRNELDFGRGTYRLRGELLDIYPA
ESEQLAVRVHLFDNEVEKITWFDPLTGKTVRTVPRITIYPKSHYVTPRNKLEAASHTIRA
ELEPRLEYFRENNKLIEAQRLKERTQYDLEMIQQLGYCNGIENYSQHLSGRPSGEAPPTL
FDYIPEDALLFLDESHVTVSQIGAMYKGDRSRKENLVNYGFRLPSAMNNRPMKFEEWERI
KPKTIYVSATPALYELEHSEQVVEQVVRPTGLIDPEIEIRPVLTQVDDVLSEITKRREKD
ERVLITTLTKRMSEDLTSYLKEYDVKVAYLHSDIDTLERMQIIHELRTGVHDVLVGINLL
REGLDMPEVSLVAIFDADKEGFLRSERALIQTIGRAARHINGKAILYADRITNSMQKAID
ETDRRREKQVAFNLEHNITPTGARRSITDKIDTGDDHDANDNQMIPIKSNLPDVDISILR
SPDLLAKEINRLEKLMKQMSRDLKFEDAAKTRDKVLELKAHLL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatgcctgaaccgcgctcgtcgcgtcagttaaatcaattggccactcagctgcaa
ggcgaagctgaaattagtggtgtcaacgcgtctggtacgcaaatatcaagtcgcgccttt
gagatggtcaccgagtttgagccagcaggcgatcagccgcaagcgataaagaaactggtt
aatggtattaatgctggcatggatgagcagctattactgggtgtgacgggttctggtaag
acctataccatggcaaaggtcatctctgagacgcaacgtccaactattatcatggcgcat
aataagacgcttgccgcccagttatatggtgagtttaagtcgttctttccgaataacgcg
gttgaatatttcgttagttattatgactattatcagccagaagcctatgtcgctgccagt
gatacctttatcgaaaaagacagcgccattaatgatcatattgatcagatgcgtctgtca
gccacgcgtgcactacttgagcgtcgtgatgcaattatcgtcgcctcagtatcctgtatc
tatggtctaggtgatccagaaagttatctaaaaatgctgctgcacgtcgtcgttggggac
aaaattgatcgcactgctaccattaaacgtcttgttgaaatgcaatatacgcgtaacgaa
ctggactttgggcgtggtacttatcgtcttcgcggtgagctgttagatatttatcctgct
gagtctgagcagctagcggtgcgtgtgcacttgtttgataatgaagtggagaaaattact
tggtttgatcctttaacagggaagacggtgcgtacagtgccgcgtattactatttatcca
aaatcacattacgtgacgccgcgcaataaattggaggctgcgagccatacaattcgtgct
gagcttgagccacggctagagtatttccgcgaaaacaataaactgattgaggcacagcgt
ctcaaagagcgtacccagtatgatcttgagatgattcaacagctcggctactgcaacggt
atcgaaaactattcacagcatctgtctggtcgtccatcaggggaagcaccaccgacgctg
tttgattacattccagaagatgcgttgttatttcttgatgagtcgcacgtgactgtgtcg
cagattggtgcaatgtataaaggtgatagatcacgtaaagagaatctcgtcaattatggc
tttcgtctaccaagtgccatgaataaccgcccgatgaagtttgaagaatgggagcgtatc
aagcctaagactatttatgtgagcgccacgcctgcattgtatgaactggaacatagtgag
caagtggtcgagcaagtcgtgcgtccaacgggtttgattgaccctgagattgagattcgt
cctgtattaacgcaggtcgatgacgtgttatcagagattactaaacgcagagaaaaagac
gaacgcgtgttaatcactaccttgaccaagcgtatgtcagaggatttgaccagctatctc
aaagaatacgatgtcaaagtcgcttatttacactcggatatcgacacccttgagcgtatg
cagatcattcatgaactgcgtacgggcgtgcatgatgtgctggtcggtattaacttgcta
cgtgaagggcttgatatgcctgaggtgtcattggtcgcgatatttgatgcggacaaagag
ggctttttgcgctctgaacgtgctctgattcagaccattggtcgggcggcgcgtcatatt
aatggtaaagccattctctatgctgaccgtattaccaacagtatgcaaaaagcgattgat
gagaccgatcgtcgccgcgaaaaacaagtcgcctttaaccttgagcataacatcacacca
acaggtgcgcgccgtagtatcacggataaaatcgatacaggtgatgaccatgatgccaac
gataatcagatgattccaattaagagcaatctgcctgatgtcgatatcagtatcttacgt
agtcctgatttattggctaaagaaatcaatcgtcttgagaagctcatgaagcagatgtcg
cgtgacttaaagtttgaggatgccgcgaaaacgcgtgacaaagtgctagagctaaaagcg
catttattgtaa
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